RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 DRD3P35462 400 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 NUDT1P36639 197 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 NR2C2P49116 596 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 ATP1A2P50993 1020 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 CCR5P51681 352 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 SUOXP51687 545 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 NEK3P51956 506 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 ADPRHP54922 357 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 IFI35P80217 286 aaPredicted RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 CTBSQ01459 385 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 RPL6Q02878 288 aaKnown RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 GBE1Q04446 702 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 PPIDQ08752 370 aaKnown RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 PDK1Q15118 436 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 TFDP3Q5H9I0 405 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 SEL1L2Q5TEA6 688 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 AGBL4Q5VU57 503 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 LYSMD4Q5XG99 296 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 ALG1LQ6GMV1 187 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 BBS12Q6ZW61 710 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 BZW1Q7L1Q6 419 aaKnown RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 CCDC50Q8IVM0 306 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 CCDC13Q8IYE1 715 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 HDDC3Q8N4P3 179 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 AADATQ8N5Z0 425 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 TEX26Q8N6G2 289 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 CHST14Q8NCH0 376 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 CADM4Q8NFZ8 388 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 OR2T34Q8NGX1 318 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 HCAR2Q8TDS4 363 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 RLN3Q8WXF3 142 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 GLMNQ92990 594 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 ERLEC1Q96DZ1 483 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 TOE1Q96GM8 510 aaKnown RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 HES6Q96HZ4 224 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 QKIQ96PU8 341 aaKnown RBP eCLIP4.02□□□□□ -1.771e-8■■■■■ 84.4
CNOT4-202ENST00000356162 OMDQ99983 421 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 HDAC8Q9BY41 377 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 CPEB1Q9BZB8 566 aaKnown RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 BTBD1Q9H0C5 482 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 KCNF1Q9H3M0 494 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 ZDHHC6Q9H6R6 413 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 PREBQ9HCU5 417 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 CD93Q9NPY3 652 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 DTLQ9NZJ0 730 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 NCDNQ9UBB6 729 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 DKK3Q9UBP4 350 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 GUCA1BQ9UMX6 200 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 ACTL7AQ9Y615 435 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 PLXNA2O75051 1894 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 A0A1W2PQ67 120 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 HACD1B0YJ81 288 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 KPNA3O00505 521 aaPredicted RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 MATN3O15232 486 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 ZSCAN12O43309 604 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 AP1G1O43747 822 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 FOXD2O60548 495 aaPredicted RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 SOCS5O75159 536 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 LEFTY1O75610 366 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 RNASEH2AO75792 299 aaKnown RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 BMP4P12644 408 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 MMP13P45452 471 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 DHPSP49366 369 aaPredicted RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 PEX5P50542 639 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 DNA2P51530 1060 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 NSUN2Q08J23 767 aaKnown RBP eCLIP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 CNTN1Q12860 1018 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 HNRNPDQ14103 355 aaKnown RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 PRKD1Q15139 912 aaPredicted RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 TEAD4Q15561 434 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 SLC14A2Q15849 920 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 MYLK3Q32MK0 819 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 ZNF805Q5CZA5 627 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 ARSJQ5FYB0 599 aaPredicted RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 WDR45BQ5MNZ6 344 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 ATXN7L2Q5T6C5 722 aaPredicted RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 PIP5KL1Q5T9C9 394 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 KIAA0895LQ68EN5 471 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 LEKR1Q6ZMV7 388 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 C1orf229Q6ZS94 237 aaPredicted RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 ERN2Q76MJ5 926 aaKnown RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 PARS2Q7L3T8 475 aaKnown RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 ASCL5Q7RTU5 278 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 SRLQ86TD4 932 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 TRIM69Q86WT6 500 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 TP53INP2Q8IXH6 220 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 RYBPQ8N488 228 aaPredicted RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 TRIM58Q8NG06 486 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 GRIN3AQ8TCU5 1115 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 GANCQ8TET4 914 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 RUBCNQ92622 972 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 RAB7BQ96AH8 199 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 ZNF641Q96N77 438 aaPredicted RBP4.02□□□□□ -1.77
CNOT4-202ENST00000356162 PSKH2Q96QS6 385 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 NUDCD1Q96RS6 583 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 ATP13A3Q9H7F0 1226 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 FBXL12Q9NXK8 326 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 SERGEFQ9UGK8 458 aa4.02□□□□□ -1.77
CNOT4-202ENST00000356162 SUSD2Q9UGT4 822 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms