RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 KERAO60938 352 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 PGDP52209 483 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 ARFIP1P53367 373 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 ZNF730Q6ZMV8 503 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 FIBCD1Q8N539 461 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 SLC22A8Q8TCC7 542 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 STARD8Q92502 1023 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 RP1L1Q8IWN7 2480 aaPredicted RBP17.35■□□□□ 0.37
COL27A1-201ENST00000356083 SSU72P8A0A1W2PR75 194 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 MAGP20916 626 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 KLRK1P26718 216 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 MGAT5Q09328 741 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 CDH17Q12864 832 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 HSDL1Q3SXM5 330 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 PERM1Q5SV97 790 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 INTS11Q5TA45 600 aaKnown RBP17.35■□□□□ 0.37
COL27A1-201ENST00000356083 ARMCX6Q7L4S7 300 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 CASKIN2Q8WXE0 1202 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 ZNF318Q5VUA4 2279 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 HAT1O14929 419 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 AKAP8O43823 692 aaKnown RBP17.35■□□□□ 0.37
COL27A1-201ENST00000356083 VLDLRP98155 873 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 SQLEQ14534 574 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 CCNJLQ8IV13 435 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 PRMT6Q96LA8 375 aaPredicted RBP17.35■□□□□ 0.37
COL27A1-201ENST00000356083 SSTR1P30872 391 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 CEP295NLQ96MC4 621 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 CHID1Q9BWS9 393 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 NKIRAS2Q9NYR9 191 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 TMCO1Q9UM00 188 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 PCDHB11Q9Y5F2 797 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 CFIP05156 583 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 PLGLB1Q02325 96 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 NR1D2Q14995 579 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 SPANXN3Q5MJ09 141 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 TMPRSS11BQ86T26 416 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 CADM2Q8N3J6 435 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 DHRSXQ8N5I4 330 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 ZNF558Q96NG5 402 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 OSGEPQ9NPF4 335 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 WHRNQ9P202 907 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 ABI3Q9P2A4 366 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 ITGA11Q9UKX5 1188 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 EFCAB6Q5THR3 1501 aa17.35■□□□□ 0.37
COL27A1-201ENST00000356083 TMEM253P0C7T8 217 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 MRPS22P82650 360 aaKnown RBP17.34■□□□□ 0.37
COL27A1-201ENST00000356083 BHLHE22Q8NFJ8 381 aaPredicted RBP17.34■□□□□ 0.37
COL27A1-201ENST00000356083 PDP2Q9P2J9 529 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 DKK3Q9UBP4 350 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 PLIN3O60664 434 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 FOXO4P98177 505 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 UBXN2BQ14CS0 331 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 MAPKAPK3Q16644 382 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 TPK1Q9H3S4 243 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 OTOL1A6NHN0 477 aaPredicted RBP17.34■□□□□ 0.37
COL27A1-201ENST00000356083 RNASEH2AO75792 299 aaKnown RBP17.34■□□□□ 0.37
COL27A1-201ENST00000356083 AQP1P29972 269 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 GRIA3P42263 894 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 CBX3Q13185 183 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 PTCHD4Q6ZW05 846 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 SIRT2Q8IXJ6 389 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 ZNF366Q8N895 744 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 DHRS7Q9Y394 339 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 RWDD3Q9Y3V2 267 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 MTF2Q9Y483 593 aaPredicted RBP17.34■□□□□ 0.37
COL27A1-201ENST00000356083 FDPSP14324 419 aaKnown RBP17.34■□□□□ 0.37
COL27A1-201ENST00000356083 PCNX4Q63HM2 1172 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 FAM151BQ6UXP7 276 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 PCDH20Q8N6Y1 951 aaKnown RBP17.34■□□□□ 0.37
COL27A1-201ENST00000356083 ZNF540Q8NDQ6 660 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 NAT14Q8WUY8 206 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 AKT1S1Q96B36 256 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 ELOVL4Q9GZR5 314 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 IL12BP29460 328 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 SNRPFP62306 86 aaKnown RBP17.34■□□□□ 0.37
COL27A1-201ENST00000356083 CPSF6Q16630 551 aaKnown RBP eCLIP17.34■□□□□ 0.37
COL27A1-201ENST00000356083 WRAP53Q9BUR4 548 aaKnown RBP17.34■□□□□ 0.37
COL27A1-201ENST00000356083 IFT46Q9NQC8 304 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.34■□□□□ 0.37
COL27A1-201ENST00000356083 DMTF1Q9Y222 760 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 GMPPBQ9Y5P6 360 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 U3KQV3 271 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 PEX11AO75192 247 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 C9P02748 559 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 AHCYP23526 432 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 CNPY4Q8N129 248 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 TATDN2Q93075 761 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 TMLHEQ9NVH6 421 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 TPST2O60704 377 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 CYP4F8P98187 520 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 PYDC1Q8WXC3 89 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 GLIS2Q9BZE0 524 aaPredicted RBP17.34■□□□□ 0.37
COL27A1-201ENST00000356083 CDC42EP4Q9H3Q1 356 aaKnown RBP17.34■□□□□ 0.37
COL27A1-201ENST00000356083 FBXO6Q9NRD1 293 aaPredicted RBP17.34■□□□□ 0.37
COL27A1-201ENST00000356083 BTRCQ9Y297 605 aa17.34■□□□□ 0.37
COL27A1-201ENST00000356083 EPHB6O15197 1021 aa17.33■□□□□ 0.37
COL27A1-201ENST00000356083 ENTPD3O75355 529 aa17.33■□□□□ 0.37
COL27A1-201ENST00000356083 CSN2P05814 226 aa17.33■□□□□ 0.37
COL27A1-201ENST00000356083 FRG1Q14331 258 aaKnown RBP17.33■□□□□ 0.37
COL27A1-201ENST00000356083 SLC30A10Q6XR72 485 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms