RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 KLF6Q99612 283 aaPredicted RBP11.34□□□□□ -0.59
FN1-204ENST00000356005 IMP3Q9NV31 184 aaKnown RBP11.34□□□□□ -0.59
FN1-204ENST00000356005 EXD2Q9NVH0 621 aa11.34□□□□□ -0.59
FN1-204ENST00000356005 C9J4A7 227 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 ELK3P41970 407 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 LAPTM5Q13571 262 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 VN1R5Q7Z5H4 357 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 OR4L1Q8NH43 312 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 FCRL2Q96LA5 508 aaPredicted RBP11.33□□□□□ -0.6
FN1-204ENST00000356005 VAV3Q9UKW4 847 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 MAFBQ9Y5Q3 323 aaPredicted RBP11.33□□□□□ -0.6
FN1-204ENST00000356005 YDJCA8MPS7 323 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 CAPN14A8MX76 684 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 HNRNPH1P31943 449 aaKnown RBP11.33□□□□□ -0.6
FN1-204ENST00000356005 CLCNKBP51801 687 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 GHRHRQ02643 423 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 DYNC1I2Q13409 638 aaKnown RBP11.33□□□□□ -0.6
FN1-204ENST00000356005 LDLRAP1Q5SW96 308 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 C12orf56Q8IXR9 622 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 CENPTQ96BT3 561 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 ERLEC1Q96DZ1 483 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 APOL4Q9BPW4 351 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 PACSIN1Q9BY11 444 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 VPS4AQ9UN37 437 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 SHROOM3Q8TF72 1996 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 ITGB5P18084 799 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 POU1F1P28069 291 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 SERPINB3P29508 390 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 DPYSL3Q14195 570 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 ITIH4Q14624 930 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 TMEM26Q6ZUK4 368 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 EFCAB3Q8N7B9 438 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 RNF157Q96PX1 679 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 LZTS1Q9Y250 596 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 VAC14Q08AM6 782 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 FASTKQ14296 549 aaKnown RBP11.33□□□□□ -0.6
FN1-204ENST00000356005 PFKFB4Q16877 469 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 RFTN2Q52LD8 501 aaPredicted RBP11.33□□□□□ -0.6
FN1-204ENST00000356005 HYIQ5T013 277 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 NSMCE2Q96MF7 247 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 ZNF607Q96SK3 696 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 INVSQ9Y283 1065 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 CXCR3P49682 368 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 TRAF2Q12933 501 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 GPAT3Q53EU6 434 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 ADGRG2Q8IZP9 1017 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 CELF5Q8N6W0 485 aaKnown RBP11.33□□□□□ -0.6
FN1-204ENST00000356005 ZNF473Q8WTR7 871 aaKnown RBP11.33□□□□□ -0.6
FN1-204ENST00000356005 STYXQ8WUJ0 223 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 MRPL57Q9BQC6 102 aaKnown RBP11.33□□□□□ -0.6
FN1-204ENST00000356005 SHCBP1LQ9BZQ2 653 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 NECTIN3Q9NQS3 549 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 PHTF1Q9UMS5 762 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 FPGTO14772 594 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 TM7SF2O76062 418 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 HOXB6P17509 224 aaKnown RBP11.33□□□□□ -0.6
FN1-204ENST00000356005 NEK3P51956 506 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 TRIM40Q6P9F5 258 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 CEP41Q9BYV8 373 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 C4BP0C0L5 1744 aa11.33□□□□□ -0.6
FN1-204ENST00000356005 RBM47A0AV96 593 aaKnown RBP11.32□□□□□ -0.6
FN1-204ENST00000356005 TRAFD1O14545 582 aaPredicted RBP11.32□□□□□ -0.6
FN1-204ENST00000356005 COL6A1P12109 1028 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 CAPN13Q6MZZ7 669 aaPredicted RBP11.32□□□□□ -0.6
FN1-204ENST00000356005 PARGQ86W56 976 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 C12orf29Q8N999 325 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 MAGEH1Q9H213 219 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 CRYBG1Q9Y4K1 1723 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 CFIP05156 583 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 EPORP19235 508 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 ATP6V1B2P21281 511 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 SLC5A3P53794 718 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 ATXN7L2Q5T6C5 722 aaPredicted RBP11.32□□□□□ -0.6
FN1-204ENST00000356005 TTC33Q6PID6 262 aaPredicted RBP11.32□□□□□ -0.6
FN1-204ENST00000356005 LRRC74BQ6ZQY2 392 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 FAM220AQ7Z4H9 259 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 ACMSDQ8TDX5 336 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 SLC35C1Q96A29 364 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 TMPRSS4Q9NRS4 437 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 ANGPT4Q9Y264 503 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 A0A087X0B3 334 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 STX11O75558 287 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 UBXN7O94888 489 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 FGRP09769 529 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 ITGA2P17301 1181 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 MAPKAPK2P49137 400 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 TLE2Q04725 743 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 KRT77Q7Z794 578 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 MICU2Q8IYU8 434 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 ZCCHC9Q8N567 271 aaKnown RBP11.32□□□□□ -0.6
FN1-204ENST00000356005 WDR36Q8NI36 951 aaKnown RBP11.32□□□□□ -0.6
FN1-204ENST00000356005 HSD17B14Q9BPX1 270 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 DNAJC16Q9Y2G8 782 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 ECDO95905 644 aaPredicted RBP11.32□□□□□ -0.6
FN1-204ENST00000356005 SOX11P35716 441 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 MTHFRP42898 656 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 POLD2P49005 469 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 DGKEP52429 567 aa11.32□□□□□ -0.6
FN1-204ENST00000356005 MRPS22P82650 360 aaKnown RBP11.32□□□□□ -0.6
FN1-204ENST00000356005 ANXA8L1Q5VT79 327 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms