RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 SEPHS1P49903 392 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 SKIV2LQ15477 1246 aaKnown RBP15.85■□□□□ 0.13
RTN3-205ENST00000356000 GEN1Q17RS7 908 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 SVOPQ8N4V2 548 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 PCDH20Q8N6Y1 951 aaKnown RBP15.85■□□□□ 0.13
RTN3-205ENST00000356000 FEZF2Q8TBJ5 459 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 SH3KBP1Q96B97 665 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 TOE1Q96GM8 510 aaKnown RBP15.85■□□□□ 0.13
RTN3-205ENST00000356000 RNF170Q96K19 258 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 C11orf70Q9BRQ4 267 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 SCPEP1Q9HB40 452 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 SYBUQ9NX95 663 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 SARDHQ9UL12 918 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 ADORA2AP29274 412 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 GYG1P46976 350 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 PRELPP51888 382 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 NDST1P52848 882 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 SHEQ5VZ18 495 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 TXNRD3NBQ6F5E7 133 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 TRAF7Q6Q0C0 670 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 ZNF677Q86XU0 584 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 CCDC185Q8N715 623 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 CENPNQ96H22 339 aaPredicted RBP15.85■□□□□ 0.13
RTN3-205ENST00000356000 NECTIN3Q9NQS3 549 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 BAG5Q9UL15 447 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 OAZ3Q9UMX2 235 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 HCN4Q9Y3Q4 1203 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 THSD7BQ9C0I4 1608 aa15.85■□□□□ 0.13
RTN3-205ENST00000356000 EI24O14681 340 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 CHADO15335 359 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 IL12AP29459 219 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 DSG3P32926 999 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 HK2P52789 917 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 SRP54P61011 504 aaKnown RBP15.84■□□□□ 0.13
RTN3-205ENST00000356000 SMARCB1Q12824 385 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 DHFR2Q86XF0 187 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 RIOX2Q8IUF8 465 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 CELF2-AS1Q8N7Q2 184 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 OR13J1Q8NGT2 312 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 NDNFQ8TB73 568 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 DYNC2LI1Q8TCX1 351 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 URGCPQ8TCY9 931 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 STON2Q8WXE9 905 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 REXO5Q96IC2 774 aaKnown RBP15.84■□□□□ 0.13
RTN3-205ENST00000356000 SLC45A3Q96JT2 553 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 RIPOR3Q96MK2 946 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 STRA6Q9BX79 667 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 PCIF1Q9H4Z3 704 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 TMEM206Q9H813 350 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 EHMT1Q9H9B1 1298 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 USP17L5A8MUK1 530 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 H0YAE9 185 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 NEMP1O14524 444 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 CTDSP2O14595 271 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 AXIN1O15169 862 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 TBX1O43435 398 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 SLITRK5O94991 958 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 ALDOAP04075 364 aaKnown RBP15.84■□□□□ 0.13
RTN3-205ENST00000356000 AXLP30530 894 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 ACOT2P49753 483 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 DYNLT1P63172 113 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 KRR1Q13601 381 aaKnown RBP15.84■□□□□ 0.13
RTN3-205ENST00000356000 PPP1R3AQ16821 1122 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 ADPRMQ3LIE5 342 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 TBCELQ5QJ74 424 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 TMEM236Q5W0B7 351 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 CATSPER4Q7RTX7 472 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 WDR49Q8IV35 697 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 UBQLNLQ8IYU4 475 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 ACSF2Q96CM8 615 aaPredicted RBP15.84■□□□□ 0.13
RTN3-205ENST00000356000 NT5C1BQ96P26 610 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 KCTD14Q9BQ13 255 aaPredicted RBP15.84■□□□□ 0.13
RTN3-205ENST00000356000 ZSCAN5AQ9BUG6 496 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 ALOXE3Q9BYJ1 711 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 SOX17Q9H6I2 414 aaPredicted RBP15.84■□□□□ 0.13
RTN3-205ENST00000356000 MAT2BQ9NZL9 334 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 TNFRSF10DQ9UBN6 386 aa15.84■□□□□ 0.13
RTN3-205ENST00000356000 FRMPD2Q68DX3 1309 aaPredicted RBP15.84■□□□□ 0.13
RTN3-205ENST00000356000 ARPC4-TTLL3A0A0A6YYG9 625 aa15.83■□□□□ 0.13
RTN3-205ENST00000356000 FAM149AA5PLN7 773 aa15.83■□□□□ 0.13
RTN3-205ENST00000356000 GOLGA8JA6NMD2 632 aa15.83■□□□□ 0.13
RTN3-205ENST00000356000 CRHBPP24387 322 aa15.83■□□□□ 0.13
RTN3-205ENST00000356000 FASP25445 335 aa15.83■□□□□ 0.13
RTN3-205ENST00000356000 OR2B6P58173 313 aa15.83■□□□□ 0.13
RTN3-205ENST00000356000 TYSND1Q2T9J0 566 aa15.83■□□□□ 0.13
RTN3-205ENST00000356000 RBM48Q5RL73 367 aaKnown RBP15.83■□□□□ 0.13
RTN3-205ENST00000356000 SDE2Q6IQ49 451 aa15.83■□□□□ 0.13
RTN3-205ENST00000356000 METTL2BQ6P1Q9 378 aaKnown RBP15.83■□□□□ 0.13
RTN3-205ENST00000356000 TRMT10BQ6PF06 316 aaKnown RBP15.83■□□□□ 0.13
RTN3-205ENST00000356000 GDPD3Q7L5L3 318 aa15.83■□□□□ 0.13
RTN3-205ENST00000356000 ANKRD53Q8N9V6 530 aa15.83■□□□□ 0.13
RTN3-205ENST00000356000 SLC44A5Q8NCS7 719 aa15.83■□□□□ 0.13
RTN3-205ENST00000356000 TMEM174Q8WUU8 243 aa15.83■□□□□ 0.13
RTN3-205ENST00000356000 JMJD4Q9H9V9 463 aa15.83■□□□□ 0.13
RTN3-205ENST00000356000 FBXO5Q9UKT4 447 aa15.83■□□□□ 0.13
RTN3-205ENST00000356000 NOSIPQ9Y314 301 aaKnown RBP15.83■□□□□ 0.13
RTN3-205ENST00000356000 GAKO14976 1311 aa15.83■□□□□ 0.12
RTN3-205ENST00000356000 C3orf70A6NLC5 250 aaPredicted RBP15.83■□□□□ 0.12
RTN3-205ENST00000356000 NDUFA2O43678 99 aa15.83■□□□□ 0.12
RTN3-205ENST00000356000 ACTR2P61160 394 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms