RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 CES1P23141 567 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 PSMB4P28070 264 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 OXTRP30559 389 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 RALGPS1Q5JS13 557 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 FAM131CQ96AQ9 280 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 ECHDC3Q96DC8 303 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 OXNAD1Q96HP4 312 aaPredicted RBP18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 GORASP1Q9BQQ3 440 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 GBA3Q9H227 469 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 DKK3Q9UBP4 350 aa18.03■□□□□ 0.48
PDLIM7-202ENST00000355841 SDK1Q7Z5N4 2213 aa18.02■□□□□ 0.48
PDLIM7-202ENST00000355841 TBC1D3DA0A087WVF3 549 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 TBC1D3IA0A087WXS9 549 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 TBC1D3EA0A087X179 549 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 TBC1D3KA0A087X1G2 549 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 TBC1D3FA6NER0 549 aaPredicted RBP18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 C5orf60A6NFR6 353 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 A8MX80 341 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 TBC1D3LB9A6J9 549 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 SPINT1O43278 529 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 PLRG1O43660 514 aaKnown RBP18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 SOCS5O75159 536 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 PGLSO95336 258 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 TBC1D3HP0C7X1 549 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 CNR2P34972 360 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 SFSWAPQ12872 951 aaKnown RBP18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 UGP2Q16851 508 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 PLK5Q496M5 336 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 FAXCQ5TGI0 409 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 TBC1D3GQ6DHY5 549 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 TBC1D3CQ6IPX1 549 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 DRICH1Q6PGQ1 229 aaPredicted RBP18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 BRAT1Q6PJG6 821 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 ZC3H14Q6PJT7 736 aaKnown RBP18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 TBC1D3Q8IZP1 549 aaPredicted RBP18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 TDRD1Q9BXT4 1180 aaKnown RBP18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 DUSP15Q9H1R2 295 aaPredicted RBP18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 KCNH6Q9H252 994 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 SGK2Q9HBY8 427 aa18.02■□□□□ 0.47
PDLIM7-202ENST00000355841 TSPAN11A1L157 253 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 CFAP69A5D8W1 941 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 OPHN1O60890 802 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 METTL18O95568 372 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 PRLP01236 227 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 XPAP23025 273 aaPredicted RBP18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 STIP1P31948 543 aaKnown RBP18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 PTGER3P43115 390 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 SYCP2LQ5T4T6 812 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 ARMC12Q5T9G4 340 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 ARHGEF18Q6ZSZ5 1173 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 GSTA5Q7RTV2 222 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 TADA1Q96BN2 335 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 RTP4Q96DX8 246 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 FCRL5Q96RD9 977 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 PCDH12Q9NPG4 1184 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 HOMER3Q9NSC5 361 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 DRG1Q9Y295 367 aaKnown RBP18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 FADS3Q9Y5Q0 445 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 WDR87Q6ZQQ6 2873 aa18.01■□□□□ 0.47
PDLIM7-202ENST00000355841 A0A0U1RQS6 177 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 UPK3BL1B0FP48 263 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 UPK3BL2E5RIL1 263 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 NEMP1O14524 444 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 SLC7A4O43246 635 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 FZD6O60353 706 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 GCATO75600 419 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 PCDH8O95206 1070 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 CPP00450 1065 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 CTPS1P17812 591 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 PPP2CBP62714 309 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 PPP2CAP67775 309 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 GALNT3Q14435 633 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 CYP1B1Q16678 543 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 ITPRIPL1Q6GPH6 555 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 SLC36A4Q6YBV0 504 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 SLC41A1Q8IVJ1 513 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 CCDC89Q8N998 374 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 LPCAT1Q8NF37 534 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 HSPA12BQ96MM6 686 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 DDX47Q9H0S4 455 aaKnown RBP18■□□□□ 0.47
PDLIM7-202ENST00000355841 PCDH9Q9HC56 1237 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 ANKRD36A6QL64 1941 aa18■□□□□ 0.47
PDLIM7-202ENST00000355841 GOLGA6L10A0A0M3HER8 536 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 URI1O94763 535 aaPredicted RBP17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 FSBPO95073 299 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 ALPIP09923 528 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 MAT2AP31153 395 aaKnown RBP17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 COILP38432 576 aaPredicted RBP17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 WNT3AP56704 352 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 FAM193AP78312 1265 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 CCDC15Q0P6D6 951 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 OLIG2Q13516 323 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 TRIP13Q15645 432 aaPredicted RBP17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 CCDC137Q6PK04 289 aaKnown RBP17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 LPCAT2Q7L5N7 544 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 IPMKQ8NFU5 416 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 OR2T34Q8NGX1 318 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 HCAR2Q8TDS4 363 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 PIH1D2Q8WWB5 315 aa17.99■□□□□ 0.47
PDLIM7-202ENST00000355841 KLK6Q92876 244 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms