RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 ELOVL2Q9NXB9 296 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 VPS18Q9P253 973 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 BCCIPQ9P287 314 aaKnown RBP eCLIP15.73■□□□□ 0.11
CTSA-202ENST00000354880 SLC24A2Q9UI40 661 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 TCAF1Q9Y4C2 921 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 MYLKQ15746 1914 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 KIAA1549LQ6ZVL6 1849 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 HEATR9A2RTY3 570 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 PRRT4C9JH25 899 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 RGS16O15492 202 aaPredicted RBP15.73■□□□□ 0.11
CTSA-202ENST00000354880 MBTPS2O43462 519 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 PIAS1O75925 651 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 C1QAP02745 245 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 PDHA1P08559 390 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 ALADP13716 330 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 GCAP28676 217 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 OPRD1P41143 372 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 EIF2DP41214 584 aaKnown RBP15.73■□□□□ 0.11
CTSA-202ENST00000354880 BCL2L1Q07817 233 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 EFTUD2Q15029 972 aaKnown RBP eCLIP15.73■□□□□ 0.116e-11■■■■■ 49.2
CTSA-202ENST00000354880 TDRPQ86YL5 185 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 TERB1Q8NA31 727 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.73■□□□□ 0.11
CTSA-202ENST00000354880 PDCD6IPQ8WUM4 868 aaKnown RBP15.73■□□□□ 0.11
CTSA-202ENST00000354880 ATP6V1G3Q96LB4 118 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 ZNF778Q96MU6 729 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 FCRL3Q96P31 734 aaPredicted RBP15.73■□□□□ 0.11
CTSA-202ENST00000354880 RANBP9Q96S59 729 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 ATP13A3Q9H7F0 1226 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 BRD9Q9H8M2 597 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 SLC8A2Q9UPR5 921 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 FAM169AQ9Y6X4 670 aa15.73■□□□□ 0.11
CTSA-202ENST00000354880 ZCWPW2A0A1B0GU75 182 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 TIMM44O43615 452 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 BNIP3LO60238 219 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 NMBRP28336 390 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 OAS2P29728 719 aaKnown RBP15.72■□□□□ 0.11
CTSA-202ENST00000354880 SEPT6Q14141 434 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 FRG1Q14331 258 aaKnown RBP15.72■□□□□ 0.11
CTSA-202ENST00000354880 EIF4HQ15056 248 aaKnown RBP15.72■□□□□ 0.11
CTSA-202ENST00000354880 PTPRNQ16849 979 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 MYLK3Q32MK0 819 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 CARD16Q5EG05 197 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 AGBL2Q5U5Z8 902 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 KCTD16Q68DU8 428 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 GPR153Q6NV75 609 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 Q6ZVU0 165 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 CAMK1DQ8IU85 385 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 PLPP6Q8IY26 295 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 PHTF2Q8N3S3 785 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 RIBC1Q8N443 379 aaPredicted RBP15.72■□□□□ 0.11
CTSA-202ENST00000354880 NXPE3Q969Y0 559 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 MRRFQ96E11 262 aaKnown RBP15.72■□□□□ 0.11
CTSA-202ENST00000354880 MYO19Q96H55 970 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 PAFAH2Q99487 392 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 PPANQ9NQ55 473 aaKnown RBP15.72■□□□□ 0.11
CTSA-202ENST00000354880 CTNNAL1Q9UBT7 734 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 PRKAG3Q9UGI9 489 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 PLA2G4CQ9UP65 541 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 PCDHB9Q9Y5E1 797 aa15.72■□□□□ 0.11
CTSA-202ENST00000354880 FAM159BA6NKW6 160 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.71■□□□□ 0.11
CTSA-202ENST00000354880 HMGB1P1B2RPK0 211 aaPredicted RBP15.71■□□□□ 0.11
CTSA-202ENST00000354880 ANKRD66B4E2M5 251 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 C2CD4DB7Z1M9 353 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 FZD6O60353 706 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 SOCS5O75159 536 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 PIGNO95427 931 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 FOSL2P15408 326 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 GKP32189 559 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 MSH2P43246 934 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 CCNHP51946 323 aaPredicted RBP15.71■□□□□ 0.11
CTSA-202ENST00000354880 ST8SIA6P61647 398 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 RAD51Q06609 339 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 PREPLQ4J6C6 727 aaPredicted RBP15.71■□□□□ 0.11
CTSA-202ENST00000354880 ARMC12Q5T9G4 340 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 NAIF1Q69YI7 327 aaPredicted RBP15.71■□□□□ 0.11
CTSA-202ENST00000354880 LRRC6Q86X45 466 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 CTAGE3PQ8IX95 158 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 UNC5BQ8IZJ1 945 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 LPCAT1Q8NF37 534 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 BLOC1S5Q8TDH9 187 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 FRS2Q8WU20 508 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 PPM1EQ8WY54 764 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 CHFRQ96EP1 664 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 CERS2Q96G23 380 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 EURLQ9NYK6 297 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 PSMC3IPQ9P2W1 217 aaPredicted RBP15.71■□□□□ 0.11
CTSA-202ENST00000354880 TBK1Q9UHD2 729 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 LGALS13Q9UHV8 139 aa15.71■□□□□ 0.11
CTSA-202ENST00000354880 CCDC78A2IDD5 438 aa15.71■□□□□ 0.1
CTSA-202ENST00000354880 TBC1D3BA6NDS4 549 aa15.71■□□□□ 0.1
CTSA-202ENST00000354880 TTC34A8MYJ7 566 aa15.71■□□□□ 0.1
CTSA-202ENST00000354880 TRAFD1O14545 582 aaPredicted RBP15.71■□□□□ 0.1
CTSA-202ENST00000354880 HTRA2O43464 458 aaPredicted RBP15.71■□□□□ 0.1
CTSA-202ENST00000354880 POP4O95707 220 aaKnown RBP15.71■□□□□ 0.1
CTSA-202ENST00000354880 SERPINA4P29622 427 aa15.71■□□□□ 0.1
CTSA-202ENST00000354880 RECQLP46063 649 aaPredicted RBP15.71■□□□□ 0.1
CTSA-202ENST00000354880 RASA2Q15283 850 aa15.71■□□□□ 0.1
CTSA-202ENST00000354880 SKIDA1Q1XH10 827 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms