RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 HEPHQ9BQS7 1158 aa11.36□□□□□ -0.59
RTN3-204ENST00000354497 SPON2Q9BUD6 331 aa11.36□□□□□ -0.59
RTN3-204ENST00000354497 ZNF71Q9NQZ8 489 aaPredicted RBP11.36□□□□□ -0.59
RTN3-204ENST00000354497 COQ4Q9Y3A0 265 aa11.36□□□□□ -0.59
RTN3-204ENST00000354497 WASF2Q9Y6W5 498 aa11.36□□□□□ -0.59
RTN3-204ENST00000354497 NBPF19A0A087WUL8 3843 aa11.36□□□□□ -0.59
RTN3-204ENST00000354497 C9orf172C9J069 976 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 PAGE1O75459 146 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 GRAP2O75791 330 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 KRT5P13647 590 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 IGFALSP35858 605 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 EIF4A3P38919 411 aaKnown RBP11.35□□□□□ -0.59
RTN3-204ENST00000354497 ABL2P42684 1182 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 GPD2P43304 727 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 CCR10P46092 362 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 ATP1A2P50993 1020 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 TMEM164Q5U3C3 297 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 MACC1Q6ZN28 852 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 TFAP2DQ7Z6R9 452 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 CCNJLQ8IV13 435 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 DCAF4L2Q8NA75 395 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 DENND6BQ8NEG7 585 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 OR7D4Q8NG98 312 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 OR6K2Q8NGY2 324 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 TSACCQ96A04 125 aaPredicted RBP11.35□□□□□ -0.59
RTN3-204ENST00000354497 TBATAQ96M53 351 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 PSMG3-AS1Q96PY0 264 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 CMKLR1Q99788 373 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 TSG101Q99816 390 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 C1QTNF2Q9BXJ5 285 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 THAP9Q9H5L6 903 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 ANAPC2Q9UJX6 822 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 PLAAQ9Y263 795 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 TBC1D30Q9Y2I9 924 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 SNX10Q9Y5X0 201 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 A0A0D9SEW6 157 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 A0A1W2PQ27 194 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 A0A1W2PQ64 194 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 A0A1W2PQC6 194 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 ENO4A6NNW6 628 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 SLC16A3O15427 465 aaKnown RBP11.35□□□□□ -0.59
RTN3-204ENST00000354497 CCP110O43303 1012 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 TSPAN6O43657 245 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 AP1G1O43747 822 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 ALPIP09923 528 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 GKP32189 559 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 CCNHP51946 323 aaPredicted RBP11.35□□□□□ -0.59
RTN3-204ENST00000354497 DPYDQ12882 1025 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 ALFQ53S48 1182 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 CARD16Q5EG05 197 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 LRRC73Q5JTD7 316 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 DMRTA1Q5VZB9 504 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 GKN2Q86XP6 184 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 C9orf43Q8TAL5 461 aaPredicted RBP11.35□□□□□ -0.59
RTN3-204ENST00000354497 TMEM159Q96B96 161 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 SLC4A5Q9BY07 1137 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 EDEM3Q9BZQ6 932 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 TM6SF2Q9BZW4 377 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 KCNK4Q9NYG8 393 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 AKAP7Q9P0M2 348 aaPredicted RBP11.35□□□□□ -0.59
RTN3-204ENST00000354497 FCF1Q9Y324 198 aaKnown RBP11.35□□□□□ -0.59
RTN3-204ENST00000354497 RNF215Q9Y6U7 377 aa11.35□□□□□ -0.59
RTN3-204ENST00000354497 ZFC3H1O60293 1989 aaKnown RBP11.34□□□□□ -0.59
RTN3-204ENST00000354497 CLEC18AA5D8T8 446 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 C16orf96A6NNT2 1141 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 STMND1H3BQB6 276 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 MMP20O60882 483 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 CD82P27701 267 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 SYKP43405 635 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 RPL34P49207 117 aaKnown RBP11.34□□□□□ -0.59
RTN3-204ENST00000354497 BLKP51451 505 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 MCCD1P59942 119 aaPredicted RBP11.34□□□□□ -0.59
RTN3-204ENST00000354497 YPEL5P62699 121 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 TUBB4BP68371 445 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 C1QTNF12Q5T7M4 302 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 RETSATQ6NUM9 610 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 ENPP7Q6UWV6 458 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 CLEC18BQ6UXF7 455 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 DTX1Q86Y01 620 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 ARHGEF19Q8IW93 802 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 IL22RA1Q8N6P7 574 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 CLEC18CQ8NCF0 446 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 OR6C4Q8NGE1 309 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 GIMAP7Q8NHV1 300 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 CXorf40AQ8TE69 158 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 C1QTNF7Q9BXJ2 289 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 SLC12A9Q9BXP2 914 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 ATP13A1Q9HD20 1204 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 MBNL1Q9NR56 388 aaKnown RBP11.34□□□□□ -0.59
RTN3-204ENST00000354497 HOMER3Q9NSC5 361 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 ARMCX3Q9UH62 379 aaPredicted RBP11.34□□□□□ -0.59
RTN3-204ENST00000354497 CFAP45Q9UL16 551 aa11.34□□□□□ -0.59
RTN3-204ENST00000354497 FLNCQ14315 2725 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 PES1O00541 588 aaKnown RBP11.33□□□□□ -0.6
RTN3-204ENST00000354497 THAP12O43422 761 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 MED7O43513 233 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 RASGRP1O95267 797 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 F13A1P00488 732 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 OR1E1P30953 314 aa11.33□□□□□ -0.6
RTN3-204ENST00000354497 FMO5P49326 533 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms