RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 FERMT1Q9BQL6 677 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 WDR83Q9BRX9 315 aaKnown RBP8.37□□□□□ -1.07
CD44-205ENST00000352818 SLC46A2Q9BY10 475 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 FAM107BQ9H098 131 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 BRD8Q9H0E9 1235 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 ZCWPW1Q9H0M4 648 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 C10orf88Q9H8K7 445 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 VPS37BQ9H9H4 285 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 INTS9Q9NV88 658 aaKnown RBP8.37□□□□□ -1.07
CD44-205ENST00000352818 ETNK2Q9NVF9 386 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 GMIPQ9P107 970 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 NAALADL1Q9UQQ1 740 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 HEY1Q9Y5J3 304 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 TIMM13Q9Y5L4 95 aaPredicted RBP8.37□□□□□ -1.07
CD44-205ENST00000352818 TEX264Q9Y6I9 313 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 AK5Q9Y6K8 562 aa8.37□□□□□ -1.07
CD44-205ENST00000352818 TCRBV7S3A2A0A539 114 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 EEF2KO00418 725 aaKnown RBP8.36□□□□□ -1.07
CD44-205ENST00000352818 PPP1R12AO14974 1030 aaPredicted RBP8.36□□□□□ -1.07
CD44-205ENST00000352818 MFSD11O43934 449 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 ADAM23O75077 832 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 FAM155BO75949 473 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 STK10O94804 968 aaKnown RBP8.36□□□□□ -1.07
CD44-205ENST00000352818 OAZ2O95190 189 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 ZNF883P0CG24 379 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 MLNP12872 115 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 STX2P32856 288 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 MAGEA11P43364 429 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 CCT5P48643 541 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 GEMIN4P57678 1058 aaKnown RBP8.36□□□□□ -1.07
CD44-205ENST00000352818 CYP4F8P98187 520 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 YWHAHQ04917 246 aaPredicted RBP8.36□□□□□ -1.07
CD44-205ENST00000352818 SLC10A2Q12908 348 aaPredicted RBP8.36□□□□□ -1.07
CD44-205ENST00000352818 TARDBPQ13148 414 aaKnown RBP eCLIP8.36□□□□□ -1.07
CD44-205ENST00000352818 EIF4EBP2Q13542 120 aaPredicted RBP8.36□□□□□ -1.07
CD44-205ENST00000352818 GAB4Q2WGN9 574 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 TBC1D25Q3MII6 688 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 ARL13BQ3SXY8 428 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 BBS9Q3SYG4 887 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 MSS51Q4VC12 460 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 BRMS1LQ5PSV4 323 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 C6orf132Q5T0Z8 1188 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 TPGS2Q68CL5 300 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 TTC19Q6DKK2 380 aaPredicted RBP8.36□□□□□ -1.07
CD44-205ENST00000352818 RFX8Q6ZV50 586 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 MICALCLQ6ZW33 695 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 RABEPKQ7Z6M1 372 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 DCP1BQ8IZD4 617 aaKnown RBP8.36□□□□□ -1.07
CD44-205ENST00000352818 PYROXD2Q8N2H3 581 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 ELMOD1Q8N336 334 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 FBXO36Q8NEA4 188 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 RHBDD1Q8TEB9 315 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 NDRG1Q92597 394 aaKnown RBP8.36□□□□□ -1.07
CD44-205ENST00000352818 USP13Q92995 863 aaPredicted RBP8.36□□□□□ -1.07
CD44-205ENST00000352818 CHMP6Q96FZ7 201 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 NAF1Q96HR8 494 aaKnown RBP8.36□□□□□ -1.07
CD44-205ENST00000352818 HIC2Q96JB3 615 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 ZNF317Q96PQ6 595 aaPredicted RBP8.36□□□□□ -1.07
CD44-205ENST00000352818 KCNK16Q96T55 309 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 IL21Q9HBE4 155 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 XAB2Q9HCS7 855 aaKnown RBP8.36□□□□□ -1.07
CD44-205ENST00000352818 RAB6BQ9NRW1 208 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 TM7SF3Q9NS93 570 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 STARD5Q9NSY2 213 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 TMLHEQ9NVH6 421 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 CTNNAL1Q9UBT7 734 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 AFF4Q9UHB7 1163 aaKnown RBP8.36□□□□□ -1.07
CD44-205ENST00000352818 RABGEF1Q9UJ41 708 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 SSUH2Q9Y2M2 353 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 NAV3Q8IVL0 2385 aa8.36□□□□□ -1.07
CD44-205ENST00000352818 PLXND1Q9Y4D7 1925 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 IGHV1OR15-9A0A0B4J2B8 117 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 TMEM120BA0PK00 339 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 BLACEA4D250 179 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 GOLGA8MH3BSY2 632 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 EBAG9O00559 213 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 MTSS1O43312 755 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 TNFSF14O43557 240 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 USP17L7P0C7H9 530 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 ATXN8OSP0DMR3 200 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 NCAM1P13591 858 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 VAV1P15498 845 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 ITGB6P18564 788 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 DRD4P21917 467 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 AMPD1P23109 780 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 BDNFP23560 247 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 MAOBP27338 520 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 SERPINB6P35237 376 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 SLC5A3P53794 718 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 TMPRSS3P57727 454 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 SARNPP82979 210 aaKnown RBP8.35□□□□□ -1.07
CD44-205ENST00000352818 NRG1Q02297 640 aaPredicted RBP8.35□□□□□ -1.07
CD44-205ENST00000352818 GAD2Q05329 585 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 NFE2Q16621 373 aaPredicted RBP8.35□□□□□ -1.07
CD44-205ENST00000352818 ADGRD1Q6QNK2 874 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 ATG14Q6ZNE5 492 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 ARHGEF18Q6ZSZ5 1173 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 CYS1Q717R9 158 aa8.35□□□□□ -1.07
CD44-205ENST00000352818 YTHDF3Q7Z739 585 aaKnown RBP8.35□□□□□ -1.07
CD44-205ENST00000352818 TAC4Q86UU9 113 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms