RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 TRAP1Q12931 704 aaKnown RBP24.72■■□□□ 1.55
CPNE1-202ENST00000352393 CSHL1Q14406 222 aa24.72■■□□□ 1.55
CPNE1-202ENST00000352393 TMEM259Q4ZIN3 620 aa24.72■■□□□ 1.55
CPNE1-202ENST00000352393 TWF2Q6IBS0 349 aaKnown RBP24.72■■□□□ 1.55
CPNE1-202ENST00000352393 GPR142Q7Z601 462 aa24.72■■□□□ 1.55
CPNE1-202ENST00000352393 AFAP1L2Q8N4X5 818 aa24.72■■□□□ 1.55
CPNE1-202ENST00000352393 DRAXINQ8NBI3 349 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-202ENST00000352393 RNF34Q969K3 372 aa24.72■■□□□ 1.55
CPNE1-202ENST00000352393 LENG1Q96BZ8 264 aaPredicted RBP24.72■■□□□ 1.55
CPNE1-202ENST00000352393 CCDC126Q96EE4 140 aa24.72■■□□□ 1.55
CPNE1-202ENST00000352393 FIS1Q9Y3D6 152 aa24.72■■□□□ 1.55
CPNE1-202ENST00000352393 PSMD12O00232 456 aaPredicted RBP24.71■■□□□ 1.55
CPNE1-202ENST00000352393 MATN3O15232 486 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 HLA-DQB2P05538 268 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 HOXC13P31276 330 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 CHRNA4P43681 627 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 SLC12A2P55011 1212 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 PAOXQ6QHF9 649 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 KIAA0408Q6ZU52 694 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 CUZD1Q86UP6 607 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 PPP1R2P1Q96PQ5 205 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 UHRF1Q96T88 793 aaPredicted RBP24.71■■□□□ 1.55
CPNE1-202ENST00000352393 OLFM1Q99784 485 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 CYP4F12Q9HCS2 524 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 CHST12Q9NRB3 414 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 ARHGEF38Q9NXL2 777 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 RNF11Q9Y3C5 154 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 TCRBV3S1A0A5B6 114 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 UBDO15205 165 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 IPO13O94829 963 aaKnown RBP24.71■■□□□ 1.55
CPNE1-202ENST00000352393 TMCC1O94876 653 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 ADRM1Q16186 407 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 FAM83EQ2M2I3 478 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 SLCO4A1Q96BD0 722 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 PRKD2Q9BZL6 878 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 COQ10BQ9H8M1 238 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 EML4Q9HC35 981 aaKnown RBP24.71■■□□□ 1.55
CPNE1-202ENST00000352393 CD300AQ9UGN4 299 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 PHF24Q9UPV7 400 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 AK5Q9Y6K8 562 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 BPTFQ12830 3046 aa24.71■■□□□ 1.55
CPNE1-202ENST00000352393 MIA3Q5JRA6 1907 aa24.7■■□□□ 1.55
CPNE1-202ENST00000352393 PATJQ8NI35 1801 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 PRORSD1PA6NEY8 169 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 CCDC160A6NGH7 325 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 MEIS3P2A8K0S8 358 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 PDHXO00330 501 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 RALGDSQ12967 914 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 EIF4EBP2Q13542 120 aaPredicted RBP24.7■■□□□ 1.54
CPNE1-202ENST00000352393 IKBKEQ14164 716 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 PPP1R3AQ16821 1122 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 AGKQ53H12 422 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 NEPROQ6NW34 567 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 C8orf82Q6P1X6 216 aaPredicted RBP24.7■■□□□ 1.54
CPNE1-202ENST00000352393 RANBP10Q6VN20 620 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 AMIGO2Q86SJ2 522 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 C3orf58Q8NDZ4 430 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 LRTOMTQ8WZ04 291 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 LPGAT1Q92604 370 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 MYLPFQ96A32 169 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 MRGPRX2Q96LB1 330 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 SLC39A8Q9C0K1 460 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 SPAG4Q9NPE6 437 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 SLC38A7Q9NVC3 462 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 A0A1B0GTW7 788 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 PMPCBO75439 489 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 HDCP19113 662 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 NRF1Q16656 503 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 LRRC23Q53EV4 343 aaPredicted RBP24.7■■□□□ 1.54
CPNE1-202ENST00000352393 C6orf10Q5SRN2 563 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 ARTNQ5T4W7 220 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 MANEALQ5VSG8 457 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 PTAR1Q7Z6K3 402 aaPredicted RBP24.7■■□□□ 1.54
CPNE1-202ENST00000352393 CARM1Q86X55 608 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 FSD1LQ9BXM9 530 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 TLL2Q9Y6L7 1015 aa24.7■■□□□ 1.54
CPNE1-202ENST00000352393 ARHGAP10A1A4S6 786 aa24.69■■□□□ 1.54
CPNE1-202ENST00000352393 GALNT1Q10472 559 aaPredicted RBP24.69■■□□□ 1.54
CPNE1-202ENST00000352393 SEPT6Q14141 434 aa24.69■■□□□ 1.54
CPNE1-202ENST00000352393 ZNF789Q5FWF6 425 aa24.69■■□□□ 1.54
CPNE1-202ENST00000352393 AGAP9Q5VTM2 703 aa24.69■■□□□ 1.54
CPNE1-202ENST00000352393 SPNS2Q8IVW8 549 aa24.69■■□□□ 1.54
CPNE1-202ENST00000352393 RIN3Q8TB24 985 aa24.69■■□□□ 1.54
CPNE1-202ENST00000352393 DNAJC1Q96KC8 554 aaKnown RBP24.69■■□□□ 1.54
CPNE1-202ENST00000352393 OSBPL11Q9BXB4 747 aa24.69■■□□□ 1.54
CPNE1-202ENST00000352393 SIK2Q9H0K1 926 aa24.69■■□□□ 1.54
CPNE1-202ENST00000352393 SEMA6AQ9H2E6 1030 aa24.69■■□□□ 1.54
CPNE1-202ENST00000352393 HACD3Q9P035 362 aa24.69■■□□□ 1.54
CPNE1-202ENST00000352393 FGF10O15520 208 aaPredicted RBP24.68■■□□□ 1.54
CPNE1-202ENST00000352393 SNRPB2P08579 225 aaKnown RBP24.68■■□□□ 1.54
CPNE1-202ENST00000352393 LTA4HP09960 611 aaKnown RBP24.68■■□□□ 1.54
CPNE1-202ENST00000352393 SLC7A1P30825 629 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 PSEN2P49810 448 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 CLCNKBP51801 687 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 SLC14A2Q15849 920 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 FAM45BPQ6NSW5 357 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 HACD2Q6Y1H2 254 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 RPS27LQ71UM5 84 aaKnown RBP24.68■■□□□ 1.54
CPNE1-202ENST00000352393 SCML4Q8N228 414 aa24.68■■□□□ 1.54
CPNE1-202ENST00000352393 LZTR1Q8N653 840 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms