RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 LRRC8BQ6P9F7 803 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 RNF135Q8IUD6 432 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 UNC5BQ8IZJ1 945 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 DDI1Q8WTU0 396 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 GDF15Q99988 308 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 SLC13A1Q9BZW2 595 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 NMUR2Q9GZQ4 415 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 MUC3BQ9H195 1237 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 SYBUQ9NX95 663 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 STOML1Q9UBI4 398 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 MSRAQ9UJ68 235 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 LSM7Q9UK45 103 aaKnown RBP13.55□□□□□ -0.24
UBA3-201ENST00000349511 CLEC4EQ9ULY5 219 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 XYLBO75191 536 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 MZF1P28698 734 aaPredicted RBP13.55□□□□□ -0.24
UBA3-201ENST00000349511 GCKP35557 465 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 CCNFP41002 786 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 RENBPP51606 427 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 YBEYP58557 167 aaPredicted RBP13.55□□□□□ -0.24
UBA3-201ENST00000349511 TMPRSS15P98073 1019 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 BST1Q10588 318 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 HNRNPDQ14103 355 aaKnown RBP13.55□□□□□ -0.24
UBA3-201ENST00000349511 PRPSAP1Q14558 356 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 HSF5Q4G112 596 aaPredicted RBP13.55□□□□□ -0.24
UBA3-201ENST00000349511 CERCAMQ5T4B2 595 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 CES4AQ5XG92 561 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 FAM91A1Q658Y4 838 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 CXorf57Q6NSI4 855 aaKnown RBP13.55□□□□□ -0.24
UBA3-201ENST00000349511 LINGO4Q6UY18 593 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 UNC5AQ6ZN44 842 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 TRIM42Q8IWZ5 723 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 LMNTD2Q8IXW0 634 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 PGBD5Q8N414 524 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 CFAP61Q8NHU2 1237 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 ITFG1Q8TB96 612 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 WDR60Q8WVS4 1066 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 E2F7Q96AV8 911 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 ZNF707Q96C28 371 aaPredicted RBP13.55□□□□□ -0.24
UBA3-201ENST00000349511 EXOC2Q96KP1 924 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 C7orf26Q96N11 449 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 SAMD11Q96NU1 681 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 PRKD2Q9BZL6 878 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 XAB2Q9HCS7 855 aaKnown RBP13.55□□□□□ -0.24
UBA3-201ENST00000349511 ATP13A1Q9HD20 1204 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 KCNK4Q9NYG8 393 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 ZFATQ9P243 1243 aa13.55□□□□□ -0.24
UBA3-201ENST00000349511 MUSKO15146 869 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 NVLO15381 856 aaKnown RBP13.54□□□□□ -0.24
UBA3-201ENST00000349511 SNAP91O60641 907 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 PSMG1O95456 288 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 PRAMEF12O95522 483 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 CEBPBP17676 345 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 HOXD9P28356 352 aaPredicted RBP13.54□□□□□ -0.24
UBA3-201ENST00000349511 VHLP40337 213 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 CPA2P48052 419 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 DSC2Q02487 901 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 IL10RBQ08334 325 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 LBRQ14739 615 aaKnown RBP13.54□□□□□ -0.24
UBA3-201ENST00000349511 CHI3L2Q15782 390 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 MUM1Q2TAK8 710 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 ATG16L1Q676U5 607 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 TRMT10BQ6PF06 316 aaKnown RBP13.54□□□□□ -0.24
UBA3-201ENST00000349511 LRRC49Q8IUZ0 686 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 TDRD5Q8NAT2 981 aaKnown RBP13.54□□□□□ -0.24
UBA3-201ENST00000349511 VN1R2Q8NFZ6 395 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 USP13Q92995 863 aaPredicted RBP13.54□□□□□ -0.24
UBA3-201ENST00000349511 EBNA1BP2Q99848 306 aaKnown RBP13.54□□□□□ -0.24
UBA3-201ENST00000349511 ZNF395Q9H8N7 513 aaPredicted RBP13.54□□□□□ -0.24
UBA3-201ENST00000349511 EIF2B3Q9NR50 452 aaKnown RBP13.54□□□□□ -0.24
UBA3-201ENST00000349511 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.54□□□□□ -0.24
UBA3-201ENST00000349511 NMRK1Q9NWW6 199 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 STOML2Q9UJZ1 356 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 CHD5Q8TDI0 1954 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 SDR42E2A6NKP2 422 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 PRAMEF11O60813 436 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 PDHA1P08559 390 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 LINGO3P0C6S8 592 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 CD86P42081 329 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 EPHA5P54756 1037 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 NIPAL4Q0D2K0 466 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 IHHQ14623 411 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 HTR3DQ70Z44 454 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 NUDCD3Q8IVD9 361 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 ARID3BQ8IVW6 561 aaPredicted RBP13.54□□□□□ -0.24
UBA3-201ENST00000349511 NRG4Q8WWG1 115 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 SMG7Q92540 1137 aaKnown RBP13.54□□□□□ -0.24
UBA3-201ENST00000349511 FCRL5Q96RD9 977 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 DDX50Q9BQ39 737 aaKnown RBP13.54□□□□□ -0.24
UBA3-201ENST00000349511 FICDQ9BVA6 458 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 MAGEH1Q9H213 219 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 MMADHCQ9H3L0 296 aaPredicted RBP13.54□□□□□ -0.24
UBA3-201ENST00000349511 MKS1Q9NXB0 559 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 SIRPGQ9P1W8 387 aa13.54□□□□□ -0.24
UBA3-201ENST00000349511 CAPN14A8MX76 684 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 GSTA2P09210 222 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 PGM1P36871 562 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 CHRNA4P43681 627 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 OXCT1P55809 520 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 OCRLQ01968 901 aa13.53□□□□□ -0.24
UBA3-201ENST00000349511 SLC34A1Q06495 639 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms