RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 FPGSQ05932 587 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 PTPN11Q06124 597 aaPredicted RBP14.36□□□□□ -0.11
RLIM-202ENST00000349225 ZBTB17Q13105 803 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 STX5Q13190 355 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 MAPRE1Q15691 268 aaKnown RBP14.36□□□□□ -0.11
RLIM-202ENST00000349225 GEN1Q17RS7 908 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 SLC27A3Q5K4L6 730 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 OR6B2Q6IFH4 312 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 STYK1Q6J9G0 422 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 PRR23BQ6ZRT6 265 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 SLC22A16Q86VW1 577 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 ANKRD13AQ8IZ07 590 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 CCNYL1Q8N7R7 359 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 CENPNQ96H22 339 aaPredicted RBP14.36□□□□□ -0.11
RLIM-202ENST00000349225 VPS39Q96JC1 886 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 SLC45A3Q96JT2 553 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 PDCD2LQ9BRP1 358 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 FBRSL1Q9HCM7 1045 aaKnown RBP14.36□□□□□ -0.11
RLIM-202ENST00000349225 MAP10Q9P2G4 905 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 MTRRQ9UBK8 725 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 CCDC78A2IDD5 438 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 RGS20O76081 388 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 SLC35E2BP0CK96 405 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 EEF1B2P24534 225 aaKnown RBP14.36□□□□□ -0.11
RLIM-202ENST00000349225 YWHAQP27348 245 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 CAP2P40123 477 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 HK2P52789 917 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 ARPC4P59998 168 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 CBX2Q14781 532 aaPredicted RBP14.36□□□□□ -0.11
RLIM-202ENST00000349225 LRIT3Q3SXY7 679 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 BOLA3Q53S33 107 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 MAP1SQ66K74 1059 aaPredicted RBP14.36□□□□□ -0.11
RLIM-202ENST00000349225 C4orf22Q6V702 233 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 CDAN1Q8IWY9 1227 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 PYROXD2Q8N2H3 581 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 NGLY1Q96IV0 654 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 MYRFLQ96LU7 910 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 C9orf16Q9BUW7 83 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 BTBD2Q9BX70 525 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 SLCO3A1Q9UIG8 710 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 NRP2O60462 931 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 GABBR2O75899 941 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 CABYRO75952 493 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 MTHFD1P11586 935 aaKnown RBP14.36□□□□□ -0.11
RLIM-202ENST00000349225 RGS7P49802 495 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 GALNT13Q8IUC8 556 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 MFSD6LQ8IWD5 586 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 TXNDC5Q8NBS9 432 aaKnown RBP14.36□□□□□ -0.11
RLIM-202ENST00000349225 DNERQ8NFT8 737 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 SLC22A17Q8WUG5 538 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 GPR78Q96P69 363 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 MRPL40Q9NQ50 206 aaKnown RBP14.36□□□□□ -0.11
RLIM-202ENST00000349225 TBC1D13Q9NVG8 400 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 XPR1Q9UBH6 696 aa14.36□□□□□ -0.11
RLIM-202ENST00000349225 TNS1Q9HBL0 1735 aaKnown RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 C9JVG2 144 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 MED7O43513 233 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 GMNNO75496 209 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 SNRPB2P08579 225 aaKnown RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 CHRM3P20309 590 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 HOXA10P31260 410 aaPredicted RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 RPS9P46781 194 aaKnown RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 MAPK11Q15759 364 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 ZIK1Q3SY52 487 aaPredicted RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 RNF19BQ6ZMZ0 732 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 REM2Q8IYK8 340 aaPredicted RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 SPARTQ8N0X7 666 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 ZMAT2Q96NC0 199 aaKnown RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 BCO2Q9BYV7 579 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 UPF3AQ9H1J1 476 aaKnown RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 RAVER2Q9HCJ3 691 aaKnown RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 THG1LQ9NWX6 298 aaKnown RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.35□□□□□ -0.11
RLIM-202ENST00000349225 SIX4Q9UIU6 781 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 TTC24A2A3L6 582 aaPredicted RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 POLRMTO00411 1230 aaKnown RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 CHEK2O96017 543 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 IL7RP16871 459 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 FASP25445 335 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 SLC13A2Q13183 592 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 E2F2Q14209 437 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 DUOXA2Q1HG44 320 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 SPANXN3Q5MJ09 141 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 UGT3A1Q6NUS8 523 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 CRTC3Q6UUV7 619 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 NT5DC4Q86YG4 428 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 SMG8Q8ND04 991 aaKnown RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 LILRB4Q8NHJ6 448 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 CSPG4P5Q96PW8 444 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 BEGAINQ9BUH8 593 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 DNAI2Q9GZS0 605 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 PORCNQ9H237 461 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.35□□□□□ -0.11
RLIM-202ENST00000349225 TRPC5Q9UL62 973 aaPredicted RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 RUVBL2Q9Y230 463 aaKnown RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 SLCO1B7G3V0H7 640 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 RNF103O00237 685 aa14.35□□□□□ -0.11
RLIM-202ENST00000349225 PPEF1O14829 653 aaPredicted RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 SRP72O76094 671 aaKnown RBP14.35□□□□□ -0.11
RLIM-202ENST00000349225 COL11A2P13942 1736 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms