RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 GLRBP48167 497 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 CLCN5P51795 746 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 SLC12A2P55011 1212 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 RPS24P62847 133 aaKnown RBP20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 LAMB3Q13751 1172 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 WASHC2DQ5SRD0 308 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 ICE2Q659A1 982 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 IL31Q6EBC2 164 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 CILP2Q8IUL8 1156 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 LMNTD2Q8IXW0 634 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 PEX13Q92968 403 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 NXNL1Q96CM4 212 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 MGME1Q9BQP7 344 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 CDH19Q9H159 772 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 SEPT3Q9UH03 358 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 TAGLN3Q9UI15 199 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 YIPF1Q9Y548 306 aa20.51■□□□□ 0.87
CHRNA3-202ENST00000348639 SERPINF2P08697 491 aa20.5■□□□□ 0.87
CHRNA3-202ENST00000348639 AOC1P19801 751 aa20.5■□□□□ 0.87
CHRNA3-202ENST00000348639 DLG1Q12959 904 aa20.5■□□□□ 0.87
CHRNA3-202ENST00000348639 PLD1Q13393 1074 aa20.5■□□□□ 0.87
CHRNA3-202ENST00000348639 SLC14A2Q15849 920 aa20.5■□□□□ 0.87
CHRNA3-202ENST00000348639 C1orf53Q5VUE5 145 aa20.5■□□□□ 0.87
CHRNA3-202ENST00000348639 TEX9Q8N6V9 391 aa20.5■□□□□ 0.87
CHRNA3-202ENST00000348639 ZNF781Q8N8C0 355 aa20.5■□□□□ 0.87
CHRNA3-202ENST00000348639 AUTS2Q8WXX7 1259 aa20.5■□□□□ 0.87
CHRNA3-202ENST00000348639 HDAC10Q969S8 669 aa20.5■□□□□ 0.87
CHRNA3-202ENST00000348639 DRC3Q9H069 523 aa20.5■□□□□ 0.87
CHRNA3-202ENST00000348639 GKN1Q9NS71 199 aa20.5■□□□□ 0.87
CHRNA3-202ENST00000348639 PRR5-ARHGAP8B1AHC4 643 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 KDELR3O43731 214 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 ARSDP51689 593 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 KPNA2P52292 529 aaKnown RBP20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 PRAMEP78395 509 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 ARHGAP8P85298 464 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 ACVR1Q04771 509 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 ZNF789Q5FWF6 425 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 CHST9Q7L1S5 443 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 PTAR1Q7Z6K3 402 aaPredicted RBP20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 SLC39A11Q8N1S5 342 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 ZNF689Q96CS4 500 aaPredicted RBP20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 PSKH2Q96QS6 385 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 XPR1Q9UBH6 696 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 ILVBLA1L0T0 632 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 PRRG1O14668 218 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 IRF1P10914 325 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 CSF2RAP15509 400 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 GRIA4P48058 902 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 PPP3CCP48454 512 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 UBAP2LQ14157 1087 aaKnown RBP20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 RBM20Q5T481 1227 aaKnown RBP20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 SWT1Q5T5J6 900 aaKnown RBP20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 ADGRF1Q5T601 910 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 TMPRSS6Q8IU80 811 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 OR6P1Q8NGX9 317 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 SPON2Q9BUD6 331 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 HERC2P3Q9BVR0 1158 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 KLF16Q9BXK1 252 aaPredicted RBP20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 ILKAPQ9H0C8 392 aaPredicted RBP20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 RNF38Q9H0F5 515 aa20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 MRPL46Q9H2W6 279 aaKnown RBP20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 MMADHCQ9H3L0 296 aaPredicted RBP20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 UBA2Q9UBT2 640 aaPredicted RBP20.49■□□□□ 0.87
CHRNA3-202ENST00000348639 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 ABHD14A-ACY1A0A1B0GW23 586 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 B2RBV5 119 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 ITGB8P26012 769 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 OXCT1P55809 520 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 USP4Q13107 963 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 ZNF177Q13360 481 aaPredicted RBP20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 RCN2Q14257 317 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 RFTN1Q14699 578 aaPredicted RBP20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 VEPH1Q14D04 833 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 EPGNQ6UW88 154 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 SETD3Q86TU7 594 aaPredicted RBP20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 TDRD5Q8NAT2 981 aaKnown RBP20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 BRSK1Q8TDC3 778 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 MCUR1Q96AQ8 359 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 TSPAN17Q96FV3 270 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 MRPL57Q9BQC6 102 aaKnown RBP20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 COG4Q9H9E3 785 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 AGO1Q9UL18 857 aaKnown RBP20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 RAP2CQ9Y3L5 183 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 KCTD3Q9Y597 815 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 A0A1B0GVM2 712 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 C2orf78A6NCI8 922 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 TCAF2A6NFQ2 919 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 SPECC1L-ADORA2AF8WAN1 911 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 DLX3O60479 287 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 URODP06132 367 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 SGSHP51688 502 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 RAB33AQ14088 237 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 CFAP157Q5JU67 520 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 VWA5B1Q5TIE3 1220 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 HEXDCQ8WVB3 486 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 TRIB3Q96RU7 358 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 NDNQ99608 321 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 OLFM1Q99784 485 aa20.48■□□□□ 0.87
CHRNA3-202ENST00000348639 CINPQ9BW66 212 aaPredicted RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms