RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 SEPT6Q14141 434 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 PSMD5Q16401 504 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 CLLU1OSQ5K130 101 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 GPR158Q5T848 1215 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 TRIM67Q6ZTA4 783 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 MRPL10Q7Z7H8 261 aaKnown RBP6.09□□□□□ -1.43
CLCN3-201ENST00000347613 TMEM173Q86WV6 379 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-201ENST00000347613 FUNDC1Q8IVP5 155 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 CFAP52Q8N1V2 620 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 ATAD1Q8NBU5 361 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 ELMO2Q96JJ3 720 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 FCRL5Q96RD9 977 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 SEMA6AQ9H2E6 1030 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 GPAMQ9HCL2 828 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 ATP13A1Q9HD20 1204 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 RIMS3Q9UJD0 308 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 MED16Q9Y2X0 877 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 GBF1Q92538 1859 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 A0A0D9SEW6 157 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 A8MT66 165 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 E7ENX8 843 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 SCAMP3O14828 347 aaKnown RBP6.09□□□□□ -1.43
CLCN3-201ENST00000347613 HDAC3O15379 428 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 CCNCP24863 283 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 GRIK1P39086 918 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 RGRP47804 291 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 SGSHP51688 502 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 SNX16P57768 344 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 AP2B1P63010 937 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 CRHR2Q13324 411 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 TRIP10Q15642 601 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 TSNAXIP1Q2TAA8 658 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 PCID2Q5JVF3 399 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 C6orf52Q5T4I8 152 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 IL23RQ5VWK5 629 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 NXNQ6DKJ4 435 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 NADSYN1Q6IA69 706 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 TRAF7Q6Q0C0 670 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 TAS1R1Q7RTX1 841 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 RETREG3Q86VR2 466 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 TICAM1Q8IUC6 712 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 OR13C4Q8NGS5 318 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 ARRDC2Q8TBH0 407 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 WBP2Q969T9 261 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 ATP6V1E2Q96A05 226 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 MAELQ96JY0 434 aaKnown RBP6.09□□□□□ -1.43
CLCN3-201ENST00000347613 TEX37Q96LM6 180 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 ZNF512Q96ME7 567 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-201ENST00000347613 SLC30A3Q99726 388 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 ACBD6Q9BR61 282 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 RTKNQ9BST9 563 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 NAT9Q9BTE0 207 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 ILKAPQ9H0C8 392 aaPredicted RBP6.09□□□□□ -1.43
CLCN3-201ENST00000347613 ZBTB26Q9HCK0 441 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 NT5MQ9NPB1 228 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 ADAM28Q9UKQ2 775 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 USP22Q9UPT9 525 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 RAP2CQ9Y3L5 183 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 TRPV2Q9Y5S1 764 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 CHD5Q8TDI0 1954 aa6.09□□□□□ -1.43
CLCN3-201ENST00000347613 PRORSD1PA6NEY8 169 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 CSPG5O95196 566 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ASGR1P07306 291 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ATXN1LP0C7T5 689 aaKnown RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 UGT1A6P19224 532 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 FGFR3P22607 806 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 PRDX3P30048 256 aaKnown RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 MRPS35P82673 323 aaKnown RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 MYBPC1Q00872 1141 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 FOLH1Q04609 750 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 UGT3A2Q3SY77 523 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 TECRLQ5HYJ1 363 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 MS4A13Q5J8X5 152 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 SEL1L3Q68CR1 1132 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 HMBOX1Q6NT76 420 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 LAYNQ6UX15 382 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 SCN4BQ8IWT1 228 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 CPSF7Q8N684 471 aaKnown RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 TMEM102Q8N9M5 508 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 BHLHE22Q8NFJ8 381 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ESAMQ96AP7 390 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 TMA16Q96EY4 203 aaKnown RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 EPAS1Q99814 870 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 IRF2BPLQ9H1B7 796 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 TUBB1Q9H4B7 451 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 GSTO2Q9H4Y5 243 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 VPS45Q9NRW7 570 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ABI2Q9NYB9 513 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 FBXO5Q9UKT4 447 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 TRHDEQ9UKU6 1024 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 LDB2O43679 373 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 ADAMTS4O75173 837 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 CYP11A1P05108 521 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 CCDC166P0CW27 439 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 CYBAP13498 195 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 SERPINB6P35237 376 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 SOX11P35716 441 aa6.08□□□□□ -1.44
CLCN3-201ENST00000347613 CSE1LP55060 971 aaKnown RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 MLLT6P55198 1093 aaPredicted RBP6.08□□□□□ -1.44
CLCN3-201ENST00000347613 SH3BP2P78314 561 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms