RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ALLCQ8N6M5 410 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 TOP6BLQ8N6T0 577 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 PPRC1Q5VV67 1664 aaKnown RBP23.23■■□□□ 1.31
NPAS3-201ENST00000346562 GRM6O15303 877 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 PEX11AO75192 247 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 PROCP04070 461 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 ADRA1DP25100 572 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 IDH2P48735 452 aaKnown RBP23.23■■□□□ 1.31
NPAS3-201ENST00000346562 MAPK11Q15759 364 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 PGM2Q96G03 612 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 AIF1P55008 147 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 UNC5AQ6ZN44 842 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 GPR156Q8NFN8 814 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 COMMD9Q9P000 198 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 SLC27A5Q9Y2P5 690 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 LIASO43766 372 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 PRAMEF19Q5SWL8 479 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 VSIG10LQ86VR7 867 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 AHI1Q8N157 1196 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 PCDH20Q8N6Y1 951 aaKnown RBP23.23■■□□□ 1.31
NPAS3-201ENST00000346562 LPPQ93052 612 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 PRRG4Q9BZD6 226 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 EHD3Q9NZN3 535 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 PTGFRNQ9P2B2 879 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 UBE2QL1A1L167 161 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 FBXL16Q8N461 479 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 TEX47Q8TBZ9 253 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 PHF10Q8WUB8 498 aaKnown RBP23.23■■□□□ 1.31
NPAS3-201ENST00000346562 ITCHQ96J02 903 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 DUSP9Q99956 384 aaKnown RBP23.23■■□□□ 1.31
NPAS3-201ENST00000346562 CNPPD1Q9BV87 410 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 ACTL7BQ9Y614 415 aa23.23■■□□□ 1.31
NPAS3-201ENST00000346562 CXCL14O95715 111 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 H2AFXP16104 143 aaPredicted RBP23.22■■□□□ 1.31
NPAS3-201ENST00000346562 TFEBP19484 476 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 UGT1A5P35504 534 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 SMARCB1Q12824 385 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 PIGZQ86VD9 579 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 ABCA9Q8IUA7 1624 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 APODP05090 189 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 PKNOX1P55347 436 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 CNSTQ6PJW8 725 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 OR4A15Q8NGL6 344 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 FAM163AQ96GL9 167 aaPredicted RBP23.22■■□□□ 1.31
NPAS3-201ENST00000346562 NCOA3Q9Y6Q9 1424 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 PIK3C2BO00750 1634 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 MFN2O95140 757 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 CD52P31358 61 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 SMAD3P84022 425 aaKnown RBP23.22■■□□□ 1.31
NPAS3-201ENST00000346562 TRIM40Q6P9F5 258 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 APTXQ7Z2E3 356 aaKnown RBP23.22■■□□□ 1.31
NPAS3-201ENST00000346562 RBFAQ8N0V3 343 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 BEND7Q8N7W2 519 aaPredicted RBP23.22■■□□□ 1.31
NPAS3-201ENST00000346562 RNF157Q96PX1 679 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 TOR4AQ9NXH8 423 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 ST3GAL5Q9UNP4 418 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 GMPPBQ9Y5P6 360 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 BUD23O43709 281 aaKnown RBP23.22■■□□□ 1.31
NPAS3-201ENST00000346562 GRIA4P48058 902 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 PTPRNQ16849 979 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 RGMBQ6NW40 437 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 HIST2H2ABQ8IUE6 130 aaPredicted RBP23.22■■□□□ 1.31
NPAS3-201ENST00000346562 BLOC1S4Q9NUP1 217 aa23.22■■□□□ 1.31
NPAS3-201ENST00000346562 MYL9P24844 172 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 DLG4P78352 724 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 GCNT7Q6ZNI0 430 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 PRCCQ92733 491 aaPredicted RBP23.21■■□□□ 1.31
NPAS3-201ENST00000346562 TIFAQ96CG3 184 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 LRCH1Q9Y2L9 728 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 IFI35P80217 286 aaPredicted RBP23.21■■□□□ 1.31
NPAS3-201ENST00000346562 GAS2L1Q99501 681 aaPredicted RBP23.21■■□□□ 1.31
NPAS3-201ENST00000346562 DGCR6LQ9BY27 220 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 PAIP1Q9H074 479 aaKnown RBP23.21■■□□□ 1.31
NPAS3-201ENST00000346562 SPAG4Q9NPE6 437 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 FGF1P05230 155 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 GALNT3Q14435 633 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 TTC23Q5W5X9 447 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 CCDC185Q8N715 623 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 MBOAT7Q96N66 472 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 CDT1Q9H211 546 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 TBC1D30Q9Y2I9 924 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 UBIAD1Q9Y5Z9 338 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 KCNE2Q9Y6J6 123 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 H0Y858 1186 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 PSMD10O75832 226 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 BNIP2Q12982 314 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 MYO19Q96H55 970 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 NDNQ99608 321 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 DCUN1D5Q9BTE7 237 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 C1orf50Q9BV19 199 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 FZD1Q9UP38 647 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 ASF1AQ9Y294 204 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 RIC1Q4ADV7 1423 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 SLC25A14O95258 325 aaPredicted RBP23.21■■□□□ 1.31
NPAS3-201ENST00000346562 HNF4AP41235 474 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 LIN54Q6MZP7 749 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 CXXC5Q7LFL8 322 aaKnown RBP23.21■■□□□ 1.31
NPAS3-201ENST00000346562 PHYKPLQ8IUZ5 450 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 EPS8L1Q8TE68 723 aa23.21■■□□□ 1.31
NPAS3-201ENST00000346562 ZFP14Q9HCL3 533 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms