RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 MUC3BQ9H195 1237 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 LRMDAQ9H2I8 198 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 IL21Q9HBE4 155 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 STOML2Q9UJZ1 356 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 PCDHB12Q9Y5F1 795 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 TK2O00142 265 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 MGRN1O60291 552 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 FGF18O76093 207 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 C1RP00736 705 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 APOA4P06727 396 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 COL6A2P12110 1019 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CRABP2P29373 138 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 GLRBP48167 497 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 LEPRP48357 1165 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 SCNN1BP51168 640 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 TAS2R39P59534 338 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 PRAMEP78395 509 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ZXDBP98169 803 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 RFTN1Q14699 578 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 PABPC1LQ4VXU2 614 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 FBXO46Q6PJ61 603 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ITIH5Q86UX2 942 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 LCA5Q86VQ0 697 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CILP2Q8IUL8 1156 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 SUGP1Q8IWZ8 645 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 TMEM151AQ8N4L1 468 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 PNPLA1Q8N8W4 532 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ARMC5Q96C12 935 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 SLC7A6OSQ96CW6 309 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 NSMCE3Q96MG7 304 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 OMDQ99983 421 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 NMUR2Q9GZQ4 415 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 MAFFQ9ULX9 164 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 RUVBL2Q9Y230 463 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ARL5AQ9Y689 179 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 PLXNA4Q9HCM2 1894 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 KIAA1671Q9BY89 1806 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 FCHO1O14526 889 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 TGM5O43548 720 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 TRIM13O60858 407 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 BAIAP3O94812 1187 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CNPP09543 421 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 SBK3P0C264 359 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 PIRTP0C851 137 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 HDCP19113 662 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 RASSF2P50749 326 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 POU4F1Q01851 419 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 RBM20Q5T481 1227 aaKnown RBP14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 NAPRTQ6XQN6 538 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 PARP9Q8IXQ6 854 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 FSTL5Q8N475 847 aaPredicted RBP14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ADAMTS19Q8TE59 1207 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 TRIB3Q96RU7 358 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 NDNQ99608 321 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 EBF4Q9BQW3 602 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ZBP1Q9H171 429 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 MFSD1Q9H3U5 465 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 MID2Q9UJV3 735 aa14.21□□□□□ -0.13
CDK5RAP1-202ENST00000346416 OR51F1A6NGY5 319 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 INSIG1O15503 277 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 BUD23O43709 281 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 GREM1O60565 184 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TBL1XO60907 577 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 NDST3O95803 873 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CR2P20023 1033 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 DNAJB1P25685 340 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 SLC12A2P55011 1212 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 PTPRCAPQ14761 206 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CYTH1Q15438 398 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 FSCBQ5H9T9 825 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LDB1Q86U70 411 aaPredicted RBP14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 RNF135Q8IUD6 432 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 SPATA6LQ8N4H0 392 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TTC16Q8NEE8 873 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 BRSK1Q8TDC3 778 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 SREK1Q8WXA9 508 aaKnown RBP14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 INPP5DQ92835 1189 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 NXNL1Q96CM4 212 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 SCYL1Q96KG9 808 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 TBATAQ96M53 351 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 SIKE1Q9BRV8 207 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ARL8BQ9NVJ2 186 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 PNPOQ9NVS9 261 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 OXSMQ9NWU1 459 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 STK38LQ9Y2H1 464 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CPQQ9Y646 472 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 PTPRSQ13332 1948 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 OBSL1O75147 1896 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ZBBXA8MT70 800 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 H0Y626 953 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 KLHL2O95198 593 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 LATS1O95835 1130 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 OLFM2O95897 454 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 CTSAP10619 480 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 GABRR2P28476 465 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ARF5P84085 180 aa14.2□□□□□ -0.14
CDK5RAP1-202ENST00000346416 ACVR1Q04771 509 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms