RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 MAFBQ9Y5Q3 323 aaPredicted RBP15.6■□□□□ 0.09
SRPK1-201ENST00000346162 AGRPO00253 132 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 GSTT2P0CG29 244 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 GSTT2BP0CG30 244 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 GOT1P17174 413 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 CDK9P50750 372 aaKnown RBP15.6■□□□□ 0.09
SRPK1-201ENST00000346162 HADHBP55084 474 aaKnown RBP15.6■□□□□ 0.09
SRPK1-201ENST00000346162 TOP3AQ13472 1001 aaPredicted RBP15.6■□□□□ 0.09
SRPK1-201ENST00000346162 ARHGAP17Q68EM7 881 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 PLEKHM3Q6ZWE6 761 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 STX19Q8N4C7 294 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 TLR8Q9NR97 1041 aaKnown RBP15.6■□□□□ 0.09
SRPK1-201ENST00000346162 KANSL3Q9P2N6 904 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 FAM32AQ9Y421 112 aaKnown RBP15.6■□□□□ 0.09
SRPK1-201ENST00000346162 MYH2Q9UKX2 1941 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 TCRBV9S1A1TA0A576 114 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 MANSC4A6NHS7 340 aaPredicted RBP15.6■□□□□ 0.09
SRPK1-201ENST00000346162 CBX4O00257 560 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 LRCH4O75427 683 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 ERBB2P04626 1255 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 ELAVL2Q12926 359 aaKnown RBP15.6■□□□□ 0.09
SRPK1-201ENST00000346162 METTL21CQ5VZV1 264 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 PDSS2Q86YH6 399 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 ELMO1Q92556 727 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 EBNA1BP2Q99848 306 aaKnown RBP15.6■□□□□ 0.09
SRPK1-201ENST00000346162 HPS4Q9NQG7 708 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 XPNPEP3Q9NQH7 507 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 TUBGCP4Q9UGJ1 667 aa15.6■□□□□ 0.09
SRPK1-201ENST00000346162 TOR1BO14657 336 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 HOXA2O43364 376 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 LYPLA1O75608 230 aaPredicted RBP15.59■□□□□ 0.09
SRPK1-201ENST00000346162 TIPRLO75663 272 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 CCNG1P51959 295 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 PCBP1Q15365 356 aaKnown RBP eCLIP15.59■□□□□ 0.09
SRPK1-201ENST00000346162 TAB1Q15750 504 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 FAM45BPQ6NSW5 357 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 CXCL17Q6UXB2 119 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 DDX53Q86TM3 631 aaKnown RBP15.59■□□□□ 0.09
SRPK1-201ENST00000346162 VPS33AQ96AX1 596 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 NARS2Q96I59 477 aaKnown RBP15.59■□□□□ 0.09
SRPK1-201ENST00000346162 LGMNQ99538 433 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 ZDHHC18Q9NUE0 388 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 ZNF224Q9NZL3 707 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 TPP1O14773 563 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 PEX10O60683 326 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 CKMP06732 381 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 OR1E1P30953 314 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 HK2P52789 917 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 SOCS4Q8WXH5 440 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 ADAM2Q99965 735 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 STARD7Q9NQZ5 370 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 ASB3Q9Y575 518 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 PIPSLA2A3N6 862 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 FYNP06241 537 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 HOXC6P09630 235 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 MBL2P11226 248 aaPredicted RBP15.59■□□□□ 0.09
SRPK1-201ENST00000346162 CRABP2P29373 138 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 ICAM3P32942 547 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 RELAQ04206 551 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 TRAP1Q12931 704 aaKnown RBP15.59■□□□□ 0.09
SRPK1-201ENST00000346162 CMPK2Q5EBM0 449 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 OR52E8Q6IFG1 317 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 OGFOD2Q6N063 350 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 ZDHHC24Q6UX98 284 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 TREML1Q86YW5 311 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 SLC22A9Q8IVM8 553 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 HS6ST3Q8IZP7 471 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 FAR1Q8WVX9 515 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 MARK4Q96L34 752 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 DMRTB1Q96MA1 342 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 IL22Q9GZX6 179 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 AVILO75366 819 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 MTA2O94776 668 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 PIGNO95427 931 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 OXSR1O95747 527 aaPredicted RBP15.59■□□□□ 0.09
SRPK1-201ENST00000346162 EGFRP00533 1210 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 ITIH1P19827 911 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 ATG16L2Q8NAA4 619 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 LRRC15Q8TF66 581 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 CERS2Q96G23 380 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 RTKNQ9BST9 563 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 SCUBE2Q9NQ36 999 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 VPS28Q9UK41 221 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 SNX8Q9Y5X2 465 aa15.59■□□□□ 0.09
SRPK1-201ENST00000346162 COL14A1Q05707 1796 aaKnown RBP15.58■□□□□ 0.09
SRPK1-201ENST00000346162 RGPD1P0DJD0 1748 aa15.58■□□□□ 0.09
SRPK1-201ENST00000346162 KRT87PA6NCN2 255 aa15.58■□□□□ 0.09
SRPK1-201ENST00000346162 ITM2AO43736 263 aa15.58■□□□□ 0.09
SRPK1-201ENST00000346162 MATKP42679 507 aa15.58■□□□□ 0.09
SRPK1-201ENST00000346162 CDH15P55291 814 aa15.58■□□□□ 0.09
SRPK1-201ENST00000346162 ATAD3BQ5T9A4 648 aa15.58■□□□□ 0.09
SRPK1-201ENST00000346162 NECAB2Q7Z6G3 386 aa15.58■□□□□ 0.09
SRPK1-201ENST00000346162 LRRC49Q8IUZ0 686 aa15.58■□□□□ 0.09
SRPK1-201ENST00000346162 HERC6Q8IVU3 1022 aa15.58■□□□□ 0.09
SRPK1-201ENST00000346162 HDAC2Q92769 488 aaKnown RBP15.58■□□□□ 0.09
SRPK1-201ENST00000346162 NKD2Q969F2 451 aaPredicted RBP15.58■□□□□ 0.09
SRPK1-201ENST00000346162 COMMD8Q9NX08 183 aa15.58■□□□□ 0.09
SRPK1-201ENST00000346162 ANAPC2Q9UJX6 822 aa15.58■□□□□ 0.09
SRPK1-201ENST00000346162 KDM3BQ7LBC6 1761 aa15.58■□□□□ 0.08
SRPK1-201ENST00000346162 ERCC2P18074 760 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms