RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 CTXN3Q4LDR2 81 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 PTAR1Q7Z6K3 402 aaPredicted RBP15.56■□□□□ 0.08
UPF3B-202ENST00000345865 RNF135Q8IUD6 432 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 FBXW8Q8N3Y1 598 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 TEX26Q8N6G2 289 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 HIPK4Q8NE63 616 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 ANKRD49Q8WVL7 239 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 CATSPER2Q96P56 530 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 POMKQ9H5K3 350 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 SP110Q9HB58 689 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 A0A087X1B8 175 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 DPPA5A6NC42 116 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 OR51F1A6NGY5 319 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 AIM2O14862 343 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 FKBP6O75344 327 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 ARSAP15289 507 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 ACVRL1P37023 503 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 GATMP50440 423 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 KLC1Q07866 573 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 TAF10Q12962 218 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 MRPL58Q14197 206 aaKnown RBP15.56■□□□□ 0.08
UPF3B-202ENST00000345865 TECRLQ5HYJ1 363 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 SIRPB2Q5JXA9 342 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 FAM171A1Q5VUB5 890 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 TRIM67Q6ZTA4 783 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 KIAA0408Q6ZU52 694 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 ZNF354CQ86Y25 554 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 SLC26A7Q8TE54 656 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 FATE1Q969F0 183 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 FBXO32Q969P5 355 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 TADA1Q96BN2 335 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 BTN2A3PQ96KV6 586 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 RANBP9Q96S59 729 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 CLIC5Q9NZA1 410 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 MARCH4Q9P2E8 410 aaPredicted RBP15.56■□□□□ 0.08
UPF3B-202ENST00000345865 UXTQ9UBK9 157 aaPredicted RBP15.56■□□□□ 0.08
UPF3B-202ENST00000345865 CORO1CQ9ULV4 474 aaPredicted RBP15.56■□□□□ 0.08
UPF3B-202ENST00000345865 TLL2Q9Y6L7 1015 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 CASP8AP2Q9UKL3 1982 aa15.56■□□□□ 0.08
UPF3B-202ENST00000345865 RGSL1A5PLK6 1076 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 MROH6A6NGR9 719 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 MUSKO15146 869 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 ATXN1LP0C7T5 689 aaKnown RBP15.55■□□□□ 0.08
UPF3B-202ENST00000345865 YWHAQP27348 245 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 EML3Q32P44 896 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 AAGABQ6PD74 315 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 TMEM207Q6UWW9 146 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 IZUMO2Q6UXV1 221 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 CILP2Q8IUL8 1156 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 CPSF7Q8N684 471 aaKnown RBP15.55■□□□□ 0.08
UPF3B-202ENST00000345865 CYP4F12Q9HCS2 524 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 VPS45Q9NRW7 570 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 MARCH2Q9P0N8 246 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 ADAMTS6Q9UKP5 1117 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 PAX7P23759 505 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 ATP5F1P24539 256 aaPredicted RBP15.55■□□□□ 0.08
UPF3B-202ENST00000345865 MAGEA11P43364 429 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 NUDT2P50583 147 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 HK2P52789 917 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 SLC12A2P55011 1212 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 CDKN2DP55273 166 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 PTPRCAPQ14761 206 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 TRIP4Q15650 581 aaPredicted RBP15.55■□□□□ 0.08
UPF3B-202ENST00000345865 SH2D4BQ5SQS7 431 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 C10orf120Q5SQS8 335 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 MAP3K21Q5TCX8 1036 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 NADSYN1Q6IA69 706 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 IRGCQ6NXR0 463 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 PDCD6IPQ8WUM4 868 aaKnown RBP15.55■□□□□ 0.08
UPF3B-202ENST00000345865 HDAC10Q969S8 669 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 VTI1BQ9UEU0 232 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 CDYLQ9Y232 598 aa15.55■□□□□ 0.08
UPF3B-202ENST00000345865 SLC12A8A0AV02 714 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 DRGXA6NNA5 263 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 LDB2O43679 373 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 NPHS1O60500 1241 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 IGLV3-27P01718 113 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 LINGO3P0C6S8 592 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 CCDC166P0CW27 439 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 THRAP10827 490 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 PPARGP37231 505 aaPredicted RBP15.54■□□□□ 0.08
UPF3B-202ENST00000345865 KCNC1P48547 511 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 PLK1P53350 603 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 DNAJB13P59910 316 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 POLD3Q15054 466 aaPredicted RBP15.54■□□□□ 0.08
UPF3B-202ENST00000345865 HECTD2Q5U5R9 776 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 NXNQ6DKJ4 435 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 ACAD11Q709F0 780 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 ADGRG6Q86SQ4 1221 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 ARHGAP18Q8N392 663 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 ATP6V0D2Q8N8Y2 350 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 UBXN10Q96LJ8 280 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 RPRD1AQ96P16 312 aaPredicted RBP15.54■□□□□ 0.08
UPF3B-202ENST00000345865 FAM193BQ96PV7 902 aaPredicted RBP15.54■□□□□ 0.08
UPF3B-202ENST00000345865 NCKIPSDQ9NZQ3 722 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 ACTL7AQ9Y615 435 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 LOC285095A0A1B0GVY8 99 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 A8MT66 165 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 SDHDO14521 159 aa15.54■□□□□ 0.08
UPF3B-202ENST00000345865 SYN3O14994 580 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms