RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 PDE1BQ01064 536 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 TRAF2Q12933 501 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 NAB1Q13506 487 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 PDPK2PQ6A1A2 396 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 ZNF449Q6P9G9 518 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 OR13C4Q8NGS5 318 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 VOPP1Q96AW1 172 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 IFT43Q96FT9 208 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 VPS39Q96JC1 886 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 FEM1CQ96JP0 617 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 LMLNQ96KR4 655 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 RPL10LQ96L21 214 aaKnown RBP13.69□□□□□ -0.22
CDC42-202ENST00000344548 TDRD1Q9BXT4 1180 aaKnown RBP13.69□□□□□ -0.22
CDC42-202ENST00000344548 PBX4Q9BYU1 374 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 MRM3Q9HC36 420 aaKnown RBP13.69□□□□□ -0.22
CDC42-202ENST00000344548 SNX15Q9NRS6 342 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 TDP1Q9NUW8 608 aa13.69□□□□□ -0.22
CDC42-202ENST00000344548 HEATR9A2RTY3 570 aa13.68□□□□□ -0.22
CDC42-202ENST00000344548 SNX3O60493 162 aa13.68□□□□□ -0.22
CDC42-202ENST00000344548 HAUS5O94927 633 aa13.68□□□□□ -0.22
CDC42-202ENST00000344548 PRSS56P0CW18 603 aa13.68□□□□□ -0.22
CDC42-202ENST00000344548 CNTFP26441 200 aa13.68□□□□□ -0.22
CDC42-202ENST00000344548 SERPINB4P48594 390 aa13.68□□□□□ -0.22
CDC42-202ENST00000344548 TMC5Q6UXY8 1006 aa13.68□□□□□ -0.22
CDC42-202ENST00000344548 PTAR1Q7Z6K3 402 aaPredicted RBP13.68□□□□□ -0.22
CDC42-202ENST00000344548 GDPD5Q8WTR4 605 aa13.68□□□□□ -0.22
CDC42-202ENST00000344548 HDAC10Q969S8 669 aa13.68□□□□□ -0.22
CDC42-202ENST00000344548 TBATAQ96M53 351 aa13.68□□□□□ -0.22
CDC42-202ENST00000344548 PRKD2Q9BZL6 878 aa13.68□□□□□ -0.22
CDC42-202ENST00000344548 ZNF395Q9H8N7 513 aaPredicted RBP13.68□□□□□ -0.22
CDC42-202ENST00000344548 SCUBE2Q9NQ36 999 aa13.68□□□□□ -0.22
CDC42-202ENST00000344548 TMEM216Q9P0N5 145 aa13.68□□□□□ -0.22
CDC42-202ENST00000344548 MARCH4Q9P2E8 410 aaPredicted RBP13.68□□□□□ -0.22
CDC42-202ENST00000344548 MTF2Q9Y483 593 aaPredicted RBP13.68□□□□□ -0.22
CDC42-202ENST00000344548 ZNF821O75541 412 aaPredicted RBP13.67□□□□□ -0.22
CDC42-202ENST00000344548 SAT1P21673 171 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 TYK2P29597 1187 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 CRHR1P34998 444 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 MAGEA12P43365 314 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 STK19P49842 368 aaPredicted RBP13.67□□□□□ -0.22
CDC42-202ENST00000344548 ZNF460Q14592 562 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 RFTN1Q14699 578 aaPredicted RBP13.67□□□□□ -0.22
CDC42-202ENST00000344548 SPRED3Q2MJR0 410 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 MPPE1Q53F39 396 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 RNF43Q68DV7 783 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 ZNF470Q6ECI4 717 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 KIAA0930Q6ICG6 404 aaPredicted RBP13.67□□□□□ -0.22
CDC42-202ENST00000344548 CNSTQ6PJW8 725 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 C6orf89Q6UWU4 347 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 ZNF783Q6ZMS7 281 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 ARID3BQ8IVW6 561 aaPredicted RBP13.67□□□□□ -0.22
CDC42-202ENST00000344548 CNTN4Q8IWV2 1026 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 MDGA1Q8NFP4 955 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 PTCD2Q8WV60 388 aaKnown RBP13.67□□□□□ -0.22
CDC42-202ENST00000344548 NUDCD1Q96RS6 583 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 RANBP9Q96S59 729 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 ABCB8Q9NUT2 735 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 WNT6Q9Y6F9 365 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 EBAG9O00559 213 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 DNAJC6O75061 913 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 EPOP01588 193 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 BGNP21810 368 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 HOXA9P31269 272 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 SPRP35270 261 aaPredicted RBP13.67□□□□□ -0.22
CDC42-202ENST00000344548 NRIP1P48552 1158 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 CSRP3P50461 194 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 GKAP1Q5VSY0 366 aaPredicted RBP13.67□□□□□ -0.22
CDC42-202ENST00000344548 NEPROQ6NW34 567 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 NCEH1Q6PIU2 408 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 CEP97Q8IW35 865 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 DCAF4L2Q8NA75 395 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 FIBINQ8TAL6 211 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 PDCD6IPQ8WUM4 868 aaKnown RBP13.67□□□□□ -0.22
CDC42-202ENST00000344548 RSPRY1Q96DX4 576 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 DNAJC1Q96KC8 554 aaKnown RBP13.67□□□□□ -0.22
CDC42-202ENST00000344548 APOL5Q9BWW9 433 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 VPS11Q9H270 941 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 FBXO6Q9NRD1 293 aaPredicted RBP13.67□□□□□ -0.22
CDC42-202ENST00000344548 MKS1Q9NXB0 559 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 SLC39A10Q9ULF5 831 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 RAI2Q9Y5P3 530 aa13.67□□□□□ -0.22
CDC42-202ENST00000344548 TYW5A2RUC4 315 aaKnown RBP13.66□□□□□ -0.22
CDC42-202ENST00000344548 PHGDHO43175 533 aaKnown RBP13.66□□□□□ -0.22
CDC42-202ENST00000344548 NDST3O95803 873 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 HLA-DPA1P20036 260 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 SP100P23497 879 aaPredicted RBP13.66□□□□□ -0.22
CDC42-202ENST00000344548 RHOAP61586 193 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 SEMA3AQ14563 771 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 ZNF77Q15935 545 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 SEPT7Q16181 437 aaKnown RBP13.66□□□□□ -0.22
CDC42-202ENST00000344548 PLEKHG6Q3KR16 790 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 ATG14Q6ZNE5 492 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 RGS9BPQ6ZS82 235 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 OTOAQ7RTW8 1153 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 BBS5Q8N3I7 341 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 LPCAT1Q8NF37 534 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 ISL2Q96A47 359 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 PITPNM3Q9BZ71 974 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 TNKS2Q9H2K2 1166 aa13.66□□□□□ -0.22
CDC42-202ENST00000344548 NKX2-4Q9H2Z4 354 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms