RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SLC4A1P02730 911 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 MMP2P08253 660 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 PIRTP0C851 137 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 UBTFL6P0CB48 400 aaPredicted RBP15□□□□□ -0.01
VIPAS39-202ENST00000343765 THRAP10827 490 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 SLC2A3P11169 496 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 PPARGP37231 505 aaPredicted RBP15□□□□□ -0.01
VIPAS39-202ENST00000343765 GATMP50440 423 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 POU4F1Q01851 419 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 PTPRCAPQ14761 206 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 MGAT5BQ3V5L5 792 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 IRGCQ6NXR0 463 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 DHDDSQ86SQ9 333 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 HDAC10Q969S8 669 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 MRPL57Q9BQC6 102 aaKnown RBP15□□□□□ -0.01
VIPAS39-202ENST00000343765 MARCH2Q9P0N8 246 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 PATJQ8NI35 1801 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 ENO3P13929 434 aaPredicted RBP15□□□□□ -0.01
VIPAS39-202ENST00000343765 PRDX6P30041 224 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 ACVRL1P37023 503 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 PBX3P40426 434 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 NDST2P52849 883 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 ACLYP53396 1101 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 BTKQ06187 659 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 TAF10Q12962 218 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 CDC16Q13042 620 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 CYLC2Q14093 348 aaPredicted RBP15□□□□□ -0.01
VIPAS39-202ENST00000343765 PIM3Q86V86 326 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 CCDC117Q8IWD4 279 aaPredicted RBP15□□□□□ -0.01
VIPAS39-202ENST00000343765 PGBD5Q8N414 524 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 KDM1BQ8NB78 822 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 PCSK9Q8NBP7 692 aaKnown RBP15□□□□□ -0.01
VIPAS39-202ENST00000343765 USP13Q92995 863 aaPredicted RBP15□□□□□ -0.01
VIPAS39-202ENST00000343765 ECSITQ9BQ95 431 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 TMEM248Q9NWD8 314 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 CLIC5Q9NZA1 410 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 NCKIPSDQ9NZQ3 722 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 MARCH4Q9P2E8 410 aaPredicted RBP15□□□□□ -0.01
VIPAS39-202ENST00000343765 ADAMTS6Q9UKP5 1117 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 CRYL1Q9Y2S2 319 aa15□□□□□ -0.01
VIPAS39-202ENST00000343765 RGSL1A5PLK6 1076 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 A6NHS1 94 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 WASH4PA8MWX3 477 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 LINGO3P0C6S8 592 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 RAG1P15918 1043 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 TSPAN8P19075 237 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 YWHAQP27348 245 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 PRKAA2P54646 552 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 PKNOX1P55347 436 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 PRAMEP78395 509 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 NSUN2Q08J23 767 aaKnown RBP eCLIP14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 POLD3Q15054 466 aaPredicted RBP14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 FAM83EQ2M2I3 478 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 FAM26DQ5JW98 314 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 SIRPB2Q5JXA9 342 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 RASIP1Q5U651 963 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 MSANTD2Q6P1R3 559 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 LRRC49Q8IUZ0 686 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 DSELQ8IZU8 1212 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 CFAP52Q8N1V2 620 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 ATP6V0D2Q8N8Y2 350 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 SH3RF2Q8TEC5 729 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 ANKRD49Q8WVL7 239 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 EXT2Q93063 718 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 C8orf48Q96LL4 319 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 CRISPLD1Q9H336 500 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 TNFRSF12AQ9NP84 129 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 RAMP2O60895 175 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 PAX3P23760 479 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 ATP5F1P24539 256 aaPredicted RBP14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 MTTPP55157 894 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 NRG1Q02297 640 aaPredicted RBP14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 HECTD2Q5U5R9 776 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 IL31Q6EBC2 164 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 SDCCAG8Q86SQ7 713 aaPredicted RBP14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 LCA5Q86VQ0 697 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 BLOC1S5Q8TDH9 187 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 GIPC2Q8TF65 315 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 FUBP3Q96I24 572 aaKnown RBP eCLIP14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 DDX50Q9BQ39 737 aaKnown RBP14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 GPR62Q9BZJ7 368 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 RNF186Q9NXI6 227 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 VTI1BQ9UEU0 232 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 ACTL7AQ9Y615 435 aa14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 COPG1Q9Y678 874 aaKnown RBP14.99□□□□□ -0.01
VIPAS39-202ENST00000343765 NT5C1B-RDH14C9J2C7 533 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 STX16-NPEPL1H3BU86 382 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 MT-CO1P00395 513 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 OR1E1P30953 314 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 CDKN2DP55273 166 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 GALNT3Q14435 633 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 TECRLQ5HYJ1 363 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 AAGABQ6PD74 315 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 CILP2Q8IUL8 1156 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 KYQ8NBH2 561 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 BTN2A3PQ96KV6 586 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 CDRT15Q96T59 188 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 SEMA3CQ99985 751 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 YIPF3Q9GZM5 350 aa14.98□□□□□ -0.01
VIPAS39-202ENST00000343765 CCSER2Q9H7U1 834 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms