RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 C10orf82Q8WW14 230 aa20.15■□□□□ 0.82
RTN1-202ENST00000342503 NUDCD1Q96RS6 583 aa20.15■□□□□ 0.82
RTN1-202ENST00000342503 FBXO5Q9UKT4 447 aa20.15■□□□□ 0.82
RTN1-202ENST00000342503 CHKBQ9Y259 395 aa20.15■□□□□ 0.82
RTN1-202ENST00000342503 IL1BP01584 269 aa20.14■□□□□ 0.81
RTN1-202ENST00000342503 TROVE2P10155 538 aaKnown RBP eCLIP20.14■□□□□ 0.81
RTN1-202ENST00000342503 PFKLP17858 780 aa20.14■□□□□ 0.81
RTN1-202ENST00000342503 SAT1P21673 171 aa20.14■□□□□ 0.81
RTN1-202ENST00000342503 CES1P23141 567 aa20.14■□□□□ 0.81
RTN1-202ENST00000342503 BST1Q10588 318 aa20.14■□□□□ 0.81
RTN1-202ENST00000342503 USP10Q14694 798 aaKnown RBP20.14■□□□□ 0.81
RTN1-202ENST00000342503 MFN1Q8IWA4 741 aa20.14■□□□□ 0.81
RTN1-202ENST00000342503 CPXM2Q8N436 756 aa20.14■□□□□ 0.81
RTN1-202ENST00000342503 SHKBP1Q8TBC3 707 aa20.14■□□□□ 0.81
RTN1-202ENST00000342503 RAB3IL1Q8TBN0 382 aa20.14■□□□□ 0.81
RTN1-202ENST00000342503 ALG14Q96F25 216 aa20.14■□□□□ 0.81
RTN1-202ENST00000342503 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.14■□□□□ 0.81
RTN1-202ENST00000342503 RWDD3Q9Y3V2 267 aa20.14■□□□□ 0.81
RTN1-202ENST00000342503 FAM95CA0A1B0GW59 222 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 CCL22O00626 93 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 RFPL2O75678 378 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 ARHGEF15O94989 841 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 PIRTP0C851 137 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 ALDH3A1P30838 453 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 IRS1P35568 1242 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 CD151P48509 253 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 ARSDP51689 593 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 DBN1Q16643 649 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 MFSD6LQ8IWD5 586 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 RFWD2Q8NHY2 731 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 CALML6Q8TD86 181 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 HDAC10Q969S8 669 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 TCEAL4Q96EI5 215 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 MAN1C1Q9NR34 630 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 FBXO6Q9NRD1 293 aaPredicted RBP20.13■□□□□ 0.81
RTN1-202ENST00000342503 LHX3Q9UBR4 397 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 VPS51Q9UID3 782 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 ARL5AQ9Y689 179 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 USH1CQ9Y6N9 552 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 SLC7A4O43246 635 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 HAUS5O94927 633 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 POLD2P49005 469 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 PGGT1BP53609 377 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 UBE3AQ05086 875 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 LAMB3Q13751 1172 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 PCLAFQ15004 111 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 CCDC153Q494R4 210 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 MPPE1Q53F39 396 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 GPR158Q5T848 1215 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 KIAA0408Q6ZU52 694 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 RAPH1Q70E73 1250 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 APCDD1Q8J025 514 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 BRSK1Q8TDC3 778 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 TDRD1Q9BXT4 1180 aaKnown RBP20.13■□□□□ 0.81
RTN1-202ENST00000342503 MFSD1Q9H3U5 465 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 ANKRD6Q9Y2G4 727 aa20.13■□□□□ 0.81
RTN1-202ENST00000342503 AURKAO14965 403 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 GRM6O15303 877 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 PHGDHO43175 533 aaKnown RBP20.12■□□□□ 0.81
RTN1-202ENST00000342503 BUD23O43709 281 aaKnown RBP20.12■□□□□ 0.81
RTN1-202ENST00000342503 MYOGP15173 224 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 PTPN2P17706 415 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 AVPR1AP37288 418 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 EPHA5P54756 1037 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 PTPRCAPQ14761 206 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 INO80DQ53TQ3 878 aaPredicted RBP20.12■□□□□ 0.81
RTN1-202ENST00000342503 MBLAC2Q68D91 279 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 ZCCHC23Q6ZST2 131 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 TPGS1Q6ZTW0 290 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 PTAR1Q7Z6K3 402 aaPredicted RBP20.12■□□□□ 0.81
RTN1-202ENST00000342503 FITM2Q8N6M3 262 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 OR6P1Q8NGX9 317 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 GABPB2Q8TAK5 448 aaPredicted RBP20.12■□□□□ 0.81
RTN1-202ENST00000342503 ELMO2Q96JJ3 720 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 DNAJC1Q96KC8 554 aaKnown RBP20.12■□□□□ 0.81
RTN1-202ENST00000342503 TRIM55Q9BYV6 548 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 ACTR5Q9H9F9 607 aaPredicted RBP20.12■□□□□ 0.81
RTN1-202ENST00000342503 PLK2Q9NYY3 685 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 DNMT3BQ9UBC3 853 aaKnown RBP20.12■□□□□ 0.81
RTN1-202ENST00000342503 TLK1Q9UKI8 766 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 CLEC4EQ9ULY5 219 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 ARHGAP26Q9UNA1 814 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 ARIH1Q9Y4X5 557 aaPredicted RBP20.12■□□□□ 0.81
RTN1-202ENST00000342503 SPO11Q9Y5K1 396 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 RAI2Q9Y5P3 530 aa20.12■□□□□ 0.81
RTN1-202ENST00000342503 NOTCH4Q99466 2003 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 MOSPD3O75425 235 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 UBOX5O94941 541 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 TGDSO95455 350 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 PRLP01236 227 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 FGF3P11487 239 aaPredicted RBP20.11■□□□□ 0.81
RTN1-202ENST00000342503 EPCAMP16422 314 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 LIG3P49916 1009 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 PRAMEP78395 509 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 ACVR1Q04771 509 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 STX3Q13277 289 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 CAMK1Q14012 370 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 TEAD2Q15562 447 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 ZNF789Q5FWF6 425 aa20.11■□□□□ 0.81
RTN1-202ENST00000342503 NCEH1Q6PIU2 408 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms