RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 PARP8Q8N3A8 854 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 OR2T3Q8NH03 318 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 SLC7A14Q8TBB6 771 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 TMC2Q8TDI7 906 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 PPP1R13LQ8WUF5 828 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 PEX13Q92968 403 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 ASB9Q96DX5 294 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 RNF170Q96K19 258 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 FAM20AQ96MK3 541 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 CHRDQ9H2X0 955 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 PCIF1Q9H4Z3 704 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 GPRC5CQ9NQ84 441 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 SAE1Q9UBE0 346 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 SFMBT1Q9UHJ3 866 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 MOSPD1Q9UJG1 213 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 APOBEC2Q9Y235 224 aaKnown RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 COQ4Q9Y3A0 265 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 TESMINQ9Y4I5 508 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 PCDHGA7Q9Y5G6 932 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 A0A0C4DFX4 3053 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 ARHGEF35A5YM69 484 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 TCAF2A6NFQ2 919 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 AVILO75366 819 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 GABBR2O75899 941 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 KRT75O95678 551 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 P4HBP07237 508 aaKnown RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 GARTP22102 1010 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 CYP2C18P33260 490 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 ADCYAP1R1P41586 468 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 CASP3P42574 277 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 GABRB2P47870 512 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 PHC1P78364 1004 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 KRT76Q01546 638 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 ZNF846Q147U1 533 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 NFE2Q16621 373 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 UBXN11Q5T124 520 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 KAZNQ674X7 775 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 TWF2Q6IBS0 349 aaKnown RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 CYP4V2Q6ZWL3 525 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 CCDC60Q8IWA6 550 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 RNF148Q8N7C7 305 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 DPF3Q92784 378 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 COPS5Q92905 334 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 VTI1AQ96AJ9 217 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 UBXN10Q96LJ8 280 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 GLT1D1Q96MS3 346 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 MXRA8Q9BRK3 442 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 LHPPQ9H008 270 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 COG4Q9H9E3 785 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 POPDC2Q9HBU9 364 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 POLE4Q9NR33 117 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 KCNN3Q9UGI6 736 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 CD300AQ9UGN4 299 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 SARDHQ9UL12 918 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 EIF3LQ9Y262 564 aaKnown RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 MAU2Q9Y6X3 613 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 DOCK6Q96HP0 2047 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 UBE4BO95155 1302 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 PI4K2BG5E9Z4 385 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 GAS7O60861 476 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 UGT2B11O75310 529 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 CLIC3O95833 236 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 TIMP1P01033 207 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 ALDOAP04075 364 aaKnown RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 WEE2P0C1S8 567 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 MBL2P11226 248 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 AXLP30530 894 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 PSMC5P62195 406 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 GALNT1Q10472 559 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 BMPR2Q13873 1038 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 SELPLGQ14242 412 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 MAPRE1Q15691 268 aaKnown RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 INTS11Q5TA45 600 aaKnown RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 NAPRTQ6XQN6 538 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 BNC2Q6ZN30 1099 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 PTAR1Q7Z6K3 402 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 ADAMTSL2Q86TH1 951 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 OR6F1Q8NGZ6 308 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 ELMO3Q96BJ8 720 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 MAP6Q96JE9 813 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 SPATA17Q96L03 361 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 ZNF577Q9BSK1 485 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 C2orf49Q9BVC5 232 aaPredicted RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 NOL11Q9H8H0 719 aaKnown RBP5.64□□□□□ -1.51
CSDE1-202ENST00000339438 POLR1BQ9H9Y6 1135 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 CPNE5Q9HCH3 593 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 MTMR10Q9NXD2 777 aa5.64□□□□□ -1.51
CSDE1-202ENST00000339438 hCG_2039718K7EN88 272 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 HAT1O14929 419 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 MSH4O15457 936 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 DYRK3O43781 588 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 TBC1D4O60343 1298 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 BCAS1O75363 584 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 GOT2P00505 430 aaKnown RBP5.63□□□□□ -1.51
CSDE1-202ENST00000339438 AMHP03971 560 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 PIK3R1P27986 724 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 MAGEA3P43357 314 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 NUDT2P50583 147 aa5.63□□□□□ -1.51
CSDE1-202ENST00000339438 HLCSP50747 726 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms