RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 BNIP1Q12981 228 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 TAF1BQ53T94 588 aaPredicted RBP7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 TMEM240Q5SV17 173 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 ATXN7L2Q5T6C5 722 aaPredicted RBP7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 TSTD2Q5T7W7 516 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 FAM109BQ6ICB4 259 aaPredicted RBP7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 ZNF449Q6P9G9 518 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 RPS27LQ71UM5 84 aaKnown RBP7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 TMC8Q8IU68 726 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 CENPLQ8N0S6 344 aaPredicted RBP7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 FIBCD1Q8N539 461 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 PDCD6IPQ8WUM4 868 aaKnown RBP7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 NSMCE1Q8WV22 266 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 OVCA2Q8WZ82 227 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 PLD4Q96BZ4 506 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 GRAMD1AQ96CP6 724 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 LRRC37BQ96QE4 947 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 GPR22Q99680 433 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 OLFM1Q99784 485 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 C17orf80Q9BSJ5 609 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 C1QTNF1Q9BXJ1 281 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 TMEM120AQ9BXJ8 343 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 SLC46A2Q9BY10 475 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 SHCBP1LQ9BZQ2 653 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 MAGEH1Q9H213 219 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 ECT2Q9H8V3 914 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 MKS1Q9NXB0 559 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 FNIP2Q9P278 1114 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 ARMCX1Q9P291 453 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 COPG2Q9UBF2 871 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 DCDC2Q9UHG0 476 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 HAO1Q9UJM8 370 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 FBXO5Q9UKT4 447 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 FCF1Q9Y324 198 aaKnown RBP7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 VCANP13611 3396 aa7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 ATXN2Q99700 1313 aaKnown RBP7.46□□□□□ -1.22
SRFBP1-201ENST00000339397 A0A1B0GVM2 712 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 TCAF2A6NFQ2 919 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 MROH6A6NGR9 719 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 G3V2L1 256 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 INSIG1O15503 277 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 KDELR3O43731 214 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 SNNO75324 88 aaPredicted RBP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 CLDN11O75508 207 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 OXCT1P55809 520 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 NTHL1P78549 312 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 CAMK1Q14012 370 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 SEMA3AQ14563 771 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 VWA5B1Q5TIE3 1220 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 CLEC14AQ86T13 490 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 KREMEN2Q8NCW0 462 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 MDGA1Q8NFP4 955 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 NXNL1Q96CM4 212 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 SGF29Q96ES7 293 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 TMA16Q96EY4 203 aaKnown RBP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 RPL10LQ96L21 214 aaKnown RBP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 PSKH2Q96QS6 385 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 CDK5RAP1Q96SZ6 601 aaKnown RBP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 FEM1AQ9BSK4 669 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 ACE2Q9BYF1 805 aaPredicted RBP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 TM6SF2Q9BZW4 377 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 RHOJQ9H4E5 214 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 TLE6Q9H808 572 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 VPS45Q9NRW7 570 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 PNPOQ9NVS9 261 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 UBA2Q9UBT2 640 aaPredicted RBP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 TBC1D30Q9Y2I9 924 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 USH1CQ9Y6N9 552 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 FAM95CA0A1B0GW59 222 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 GOLGA8CPA6NN73 597 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 H0YHG0 523 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 GLRA3O75311 464 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 ZMPSTE24O75844 475 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 CSKP41240 450 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 SERPINB8P50452 374 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 CSRP3P50461 194 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 HTRA4P83105 476 aaPredicted RBP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 SEMG2Q02383 582 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 STX3Q13277 289 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 THOC5Q13769 683 aaKnown RBP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 RABGAP1LQ5R372 815 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 KYAT3Q6YP21 454 aaKnown RBP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 PIM3Q86V86 326 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 CNTN4Q8IWV2 1026 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 C2CD4AQ8NCU7 369 aaPredicted RBP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 ACMSDQ8TDX5 336 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 ISL2Q96A47 359 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 RMDN1Q96DB5 314 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 IFT43Q96FT9 208 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 ELMO2Q96JJ3 720 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 TRIB3Q96RU7 358 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 MGME1Q9BQP7 344 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 TRIM55Q9BYV6 548 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 BPIFA1Q9NP55 256 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 CFAP97Q9P2B7 532 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 HSFX1Q9UBD0 423 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 VPS28Q9UK41 221 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 RUVBL2Q9Y230 463 aaKnown RBP7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 ILVBLA1L0T0 632 aa7.45□□□□□ -1.22
SRFBP1-201ENST00000339397 HEATR9A2RTY3 570 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms