RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 NTAN1Q96AB6 310 aa14.37□□□□□ -0.11
COMMD4-202ENST00000338995 LIN37Q96GY3 246 aaPredicted RBP14.37□□□□□ -0.11
COMMD4-202ENST00000338995 GFM1Q96RP9 751 aaKnown RBP14.37□□□□□ -0.11
COMMD4-202ENST00000338995 CCNL2Q96S94 520 aaPredicted RBP14.37□□□□□ -0.11
COMMD4-202ENST00000338995 WRAP53Q9BUR4 548 aaKnown RBP14.37□□□□□ -0.11
COMMD4-202ENST00000338995 LRRC61Q9BV99 259 aa14.37□□□□□ -0.11
COMMD4-202ENST00000338995 EDEM3Q9BZQ6 932 aa14.37□□□□□ -0.11
COMMD4-202ENST00000338995 TCEAL2Q9H3H9 227 aaPredicted RBP14.37□□□□□ -0.11
COMMD4-202ENST00000338995 ADAM22Q9P0K1 906 aa14.37□□□□□ -0.11
COMMD4-202ENST00000338995 GGT7Q9UJ14 662 aa14.37□□□□□ -0.11
COMMD4-202ENST00000338995 GPR34Q9UPC5 381 aa14.37□□□□□ -0.11
COMMD4-202ENST00000338995 RP1P56715 2156 aa14.37□□□□□ -0.11
COMMD4-202ENST00000338995 COL6A6A6NMZ7 2263 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 FAM72CH0Y354 149 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 PLD2O14939 933 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 CALB1P05937 261 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 GPD1P21695 349 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 STAT1P42224 750 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 INHBCP55103 352 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 LY6DQ14210 128 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 PARP15Q460N3 678 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 TCP11X2Q5H9J9 407 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 FKBP15Q5T1M5 1219 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 FAM72AQ5TYM5 149 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 FAM72DQ6L9T8 149 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 SCYL2Q6P3W7 929 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 RAB11FIP2Q7L804 512 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 PHLDB2Q86SQ0 1253 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 FAM72BQ86X60 149 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 DNAAF5Q86Y56 855 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 PAF1Q8N7H5 531 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 RTL3Q8N8U3 475 aaKnown RBP14.36□□□□□ -0.11
COMMD4-202ENST00000338995 TP53I13Q8NBR0 393 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-202ENST00000338995 SLC30A5Q8TAD4 765 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 TTC9Q92623 222 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 HMCESQ96FZ2 354 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 PRR11Q96HE9 360 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-202ENST00000338995 ZNF641Q96N77 438 aaPredicted RBP14.36□□□□□ -0.11
COMMD4-202ENST00000338995 C11orf70Q9BRQ4 267 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 APOOQ9BUR5 198 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 CLPBQ9H078 707 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 SUV39H2Q9H5I1 410 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 MBNL1Q9NR56 388 aaKnown RBP14.36□□□□□ -0.11
COMMD4-202ENST00000338995 SEPT10Q9P0V9 454 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 PCDHGA7Q9Y5G6 932 aa14.36□□□□□ -0.11
COMMD4-202ENST00000338995 NTN3O00634 580 aaPredicted RBP14.35□□□□□ -0.11
COMMD4-202ENST00000338995 JMJD7P0C870 316 aa14.35□□□□□ -0.11
COMMD4-202ENST00000338995 KELP23276 732 aa14.35□□□□□ -0.11
COMMD4-202ENST00000338995 SOX5P35711 763 aa14.35□□□□□ -0.11
COMMD4-202ENST00000338995 AIF1P55008 147 aa14.35□□□□□ -0.11
COMMD4-202ENST00000338995 SRP54P61011 504 aaKnown RBP14.35□□□□□ -0.11
COMMD4-202ENST00000338995 KCNC4Q03721 635 aa14.35□□□□□ -0.11
COMMD4-202ENST00000338995 NFATC4Q14934 902 aa14.35□□□□□ -0.11
COMMD4-202ENST00000338995 IRF4Q15306 451 aa14.35□□□□□ -0.11
COMMD4-202ENST00000338995 UGP2Q16851 508 aa14.35□□□□□ -0.11
COMMD4-202ENST00000338995 BRAT1Q6PJG6 821 aa14.35□□□□□ -0.11
COMMD4-202ENST00000338995 USP53Q70EK8 1073 aa14.35□□□□□ -0.11
COMMD4-202ENST00000338995 JAMLQ86YT9 394 aa14.35□□□□□ -0.11
COMMD4-202ENST00000338995 TSACCQ96A04 125 aaPredicted RBP14.35□□□□□ -0.11
COMMD4-202ENST00000338995 COL26A1Q96A83 441 aa14.35□□□□□ -0.11
COMMD4-202ENST00000338995 TMEM159Q96B96 161 aa14.35□□□□□ -0.11
COMMD4-202ENST00000338995 EPB41L5Q9HCM4 733 aa14.35□□□□□ -0.11
COMMD4-202ENST00000338995 SIRPGQ9P1W8 387 aa14.35□□□□□ -0.11
COMMD4-202ENST00000338995 UBA2Q9UBT2 640 aaPredicted RBP14.35□□□□□ -0.11
COMMD4-202ENST00000338995 KLQ9UEF7 1012 aa14.35□□□□□ -0.11
COMMD4-202ENST00000338995 NOCTQ9UK39 431 aaKnown RBP14.35□□□□□ -0.11
COMMD4-202ENST00000338995 FLNBO75369 2602 aaKnown RBP14.34□□□□□ -0.11
COMMD4-202ENST00000338995 A0A1W2PNU3 283 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-202ENST00000338995 CFAP69A5D8W1 941 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 SIGLEC16A6NMB1 481 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 RASA4BC9J798 803 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 FGF10O15520 208 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-202ENST00000338995 ZW10O43264 779 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 RASA4O43374 803 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 CREB3O43889 395 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 SLC5A2P31639 672 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 HTR7P34969 479 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 RFC1P35251 1148 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-202ENST00000338995 HDAC4P56524 1084 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 POLR2FP61218 127 aaKnown RBP14.34□□□□□ -0.11
COMMD4-202ENST00000338995 POLR2LP62875 67 aaKnown RBP14.34□□□□□ -0.11
COMMD4-202ENST00000338995 FMO1Q01740 532 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 CLN3Q13286 438 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 SERINC3Q13530 473 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 INPP5AQ14642 412 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 WSCD2Q2TBF2 565 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 LRRC73Q5JTD7 316 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 WDR59Q6PJI9 974 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 CCDC185Q8N715 623 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 ANKRD20A12PQ8NF67 263 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 PCDH19Q8TAB3 1148 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 JOSD2Q8TAC2 188 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 SLC20A1Q8WUM9 679 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 CCDC74AQ96AQ1 378 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 PCMTD1Q96MG8 357 aaPredicted RBP14.34□□□□□ -0.11
COMMD4-202ENST00000338995 WDR92Q96MX6 357 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 ARHGAP9Q9BRR9 750 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 VPS16Q9H269 839 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 LRRN3Q9H3W5 708 aa14.34□□□□□ -0.11
COMMD4-202ENST00000338995 CLSTN2Q9H4D0 955 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms