RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 AGR3Q8TD06 166 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 ARNTL2Q8WYA1 636 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 WDR41Q9HAD4 459 aa18.95■□□□□ 0.62
PSPC1-201ENST00000338910 H3BNH8 94 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 STX16-NPEPL1H3BU86 382 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 SLC22A2O15244 555 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 MLNP12872 115 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 MAGEA12P43365 314 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 CXCR3P49682 368 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 SESN2P58004 480 aaPredicted RBP18.94■□□□□ 0.62
PSPC1-201ENST00000338910 TSPY1Q01534 308 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 NRF1Q16656 503 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 CMC1Q7Z7K0 106 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 PATL1Q86TB9 770 aaKnown RBP18.94■□□□□ 0.62
PSPC1-201ENST00000338910 SETD3Q86TU7 594 aaPredicted RBP18.94■□□□□ 0.62
PSPC1-201ENST00000338910 CPSF7Q8N684 471 aaKnown RBP18.94■□□□□ 0.62
PSPC1-201ENST00000338910 EME1Q96AY2 570 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 UROC1Q96N76 676 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 OSBPL6Q9BZF3 934 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 ZNF385DQ9H6B1 395 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 SNX15Q9NRS6 342 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 TRIM17Q9Y577 477 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 ARHGEF37A1IGU5 675 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 MATN2O00339 956 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 SUPT3HO75486 399 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 EOMESO95936 686 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 ENO3P13929 434 aaPredicted RBP18.94■□□□□ 0.62
PSPC1-201ENST00000338910 GRIK1P39086 918 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 ENTPD1P49961 510 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 YWHAHQ04917 246 aaPredicted RBP18.94■□□□□ 0.62
PSPC1-201ENST00000338910 LSM12Q3MHD2 195 aaKnown RBP18.94■□□□□ 0.62
PSPC1-201ENST00000338910 SLC44A4Q53GD3 710 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 SPATA2LQ8IUW3 424 aaPredicted RBP18.94■□□□□ 0.62
PSPC1-201ENST00000338910 ISL2Q96A47 359 aa18.94■□□□□ 0.62
PSPC1-201ENST00000338910 BOLA2-SMG1P6H3BVE0 249 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 PGAM1P18669 254 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 PGFP49763 221 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 NDST2P52849 883 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 RFTN1Q14699 578 aaPredicted RBP18.93■□□□□ 0.62
PSPC1-201ENST00000338910 C1QTNF12Q5T7M4 302 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 PDZD4Q76G19 769 aaPredicted RBP18.93■□□□□ 0.62
PSPC1-201ENST00000338910 LRRC8DQ7L1W4 858 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 DQX1Q8TE96 717 aaKnown RBP18.93■□□□□ 0.62
PSPC1-201ENST00000338910 TRPC4APQ8TEL6 797 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 AGAP3Q96P47 875 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 OSBPL11Q9BXB4 747 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.93■□□□□ 0.62
PSPC1-201ENST00000338910 OLAHQ9NV23 265 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 INPPL1O15357 1258 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 LRIG2O94898 1065 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 PPARGP37231 505 aaPredicted RBP18.93■□□□□ 0.62
PSPC1-201ENST00000338910 GP5P40197 560 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 NUP107P57740 925 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 TUBA4AP68366 448 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 PHEXP78562 749 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 PDAP1Q13442 181 aaKnown RBP18.93■□□□□ 0.62
PSPC1-201ENST00000338910 OLIG2Q13516 323 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 IKBKEQ14164 716 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 SMAD1Q15797 465 aaKnown RBP18.93■□□□□ 0.62
PSPC1-201ENST00000338910 IL23RQ5VWK5 629 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 ELMSAN1Q6PJG2 1045 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 LZTR1Q8N653 840 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 NUF2Q9BZD4 464 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 SIK2Q9H0K1 926 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 COQ10BQ9H8M1 238 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 KLHL8Q9P2G9 620 aaPredicted RBP18.93■□□□□ 0.62
PSPC1-201ENST00000338910 PAIP2BQ9ULR5 123 aaKnown RBP18.93■□□□□ 0.62
PSPC1-201ENST00000338910 MYRFQ9Y2G1 1151 aa18.93■□□□□ 0.62
PSPC1-201ENST00000338910 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.92■□□□□ 0.62
PSPC1-201ENST00000338910 NEMP1O14524 444 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 MGAT1P26572 445 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 OR1G1P47890 313 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 HCAR3P49019 387 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 FAM189BP81408 668 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 HERC3Q15034 1050 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 ARHGEF6Q15052 776 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 MAPRE1Q15691 268 aaKnown RBP18.92■□□□□ 0.62
PSPC1-201ENST00000338910 NOMO2Q5JPE7 1267 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 UNC93B1Q9H1C4 597 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 CAAP1Q9H8G2 361 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 PNPLA3Q9NST1 481 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 IGSF9Q9P2J2 1179 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 NUDT5Q9UKK9 219 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 PRG3Q9Y2Y8 225 aaPredicted RBP18.92■□□□□ 0.62
PSPC1-201ENST00000338910 ZNF711Q9Y462 761 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 FRMPD3Q5JV73 1810 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 KANSL1LA0AUZ9 987 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 HDAC3O15379 428 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 TRIM13O60858 407 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 NBNO60934 754 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 TADA2AO75478 443 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 MPSTP25325 297 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 ADSLP30566 484 aaPredicted RBP18.92■□□□□ 0.62
PSPC1-201ENST00000338910 SLC39A12Q504Y0 691 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 SCN4BQ8IWT1 228 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 DCLK2Q8N568 766 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 ATP6V1E2Q96A05 226 aa18.92■□□□□ 0.62
PSPC1-201ENST00000338910 GATA5Q9BWX5 397 aaPredicted RBP18.92■□□□□ 0.62
PSPC1-201ENST00000338910 ILKAPQ9H0C8 392 aaPredicted RBP18.92■□□□□ 0.62
PSPC1-201ENST00000338910 TXNDC16Q9P2K2 825 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms