RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SEPT3Q9UH03 358 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 PCOLCE2Q9UKZ9 415 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 BTBD3Q9Y2F9 522 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 PCDHA13Q9Y5I0 950 aa15.42■□□□□ 0.06
PRKN-201ENST00000338468 RCCD1A6NED2 376 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 TRAFD1O14545 582 aaPredicted RBP15.41■□□□□ 0.06
PRKN-201ENST00000338468 PCDHGA12O60330 932 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 MAP3K6O95382 1288 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 PAK4O96013 591 aaPredicted RBP15.41■□□□□ 0.06
PRKN-201ENST00000338468 HNRNPA2B1P22626 353 aaKnown RBP15.41■□□□□ 0.06
PRKN-201ENST00000338468 AKT2P31751 481 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 CLDN2P57739 230 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 GBE1Q04446 702 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 GALNT2Q10471 571 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 OVGP1Q12889 678 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 SLC10A2Q12908 348 aaPredicted RBP15.41■□□□□ 0.06
PRKN-201ENST00000338468 STAT4Q14765 748 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 GRM3Q14832 879 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 SLC45A4Q5BKX6 768 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 RAD9BQ6WBX8 426 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 ABI3BPQ7Z7G0 1075 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 PROSER1Q86XN7 944 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 BAHD1Q8TBE0 780 aaPredicted RBP15.41■□□□□ 0.06
PRKN-201ENST00000338468 SKA1Q96BD8 255 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 ECHDC3Q96DC8 303 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 ZNF641Q96N77 438 aaPredicted RBP15.41■□□□□ 0.06
PRKN-201ENST00000338468 RNF157Q96PX1 679 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 TUBGCP5Q96RT8 1024 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 CAAP1Q9H8G2 361 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 ERVMER34-1Q9H9K5 563 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 GDF3Q9NR23 364 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 SALL4Q9UJQ4 1053 aa15.41■□□□□ 0.06
PRKN-201ENST00000338468 REXO2Q9Y3B8 237 aaKnown RBP15.41■□□□□ 0.06
PRKN-201ENST00000338468 EPN1Q9Y6I3 576 aaPredicted RBP15.41■□□□□ 0.06
PRKN-201ENST00000338468 POM121BA6NF01 834 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 ZNF487B1APH4 448 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 TAF4O00268 1085 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 COMTP21964 271 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 GARSP41250 739 aaKnown RBP15.4■□□□□ 0.06
PRKN-201ENST00000338468 CCT8P50990 548 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 SCNN1BP51168 640 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 HNRNPDQ14103 355 aaKnown RBP15.4■□□□□ 0.06
PRKN-201ENST00000338468 UGP2Q16851 508 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 TMEM52BQ4KMG9 183 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 LRRC38Q5VT99 294 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 KDM7AQ6ZMT4 941 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 TMEM139Q8IV31 216 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 MAP7D3Q8IWC1 876 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 SLC22A18ASQ8N1D0 253 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 TEX26Q8N6G2 289 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 OR13H1Q8NG92 308 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 LRRN4Q8WUT4 740 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 ASB12Q8WXK4 309 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 MAML1Q92585 1016 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 LENG8Q96PV6 779 aaPredicted RBP15.4■□□□□ 0.06
PRKN-201ENST00000338468 MGME1Q9BQP7 344 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 GOLPH3Q9H4A6 298 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 PCDH12Q9NPG4 1184 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 GPR27Q9NS67 375 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 HS3ST3A1Q9Y663 406 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 ANKRD36A6QL64 1941 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 SHROOM3Q8TF72 1996 aa15.4■□□□□ 0.06
PRKN-201ENST00000338468 LRRD1A4D1F6 860 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 NEMP1O14524 444 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 FLRT2O43155 660 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 DFNA5O60443 496 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 MMP20O60882 483 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 NDUFA10O95299 355 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 PRKCGP05129 697 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 THEGLP0DJG4 465 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 SERPINA4P29622 427 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 CYLC1P35663 651 aaPredicted RBP15.39■□□□□ 0.05
PRKN-201ENST00000338468 SLC1A1P43005 524 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 RXRGP48443 463 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 RENBPP51606 427 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 MAXP61244 160 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 AP1S1P61966 158 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 ZNF235Q14590 738 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 IHHQ14623 411 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 BRAT1Q6PJG6 821 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 KANSL1Q7Z3B3 1105 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 ZSCAN30Q86W11 494 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 GATAD2AQ86YP4 633 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 TMTC1Q8IUR5 882 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 LRRC49Q8IUZ0 686 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 CHCHD4Q8N4Q1 142 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 PLD5Q8N7P1 536 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 SAP25Q8TEE9 199 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 CENPTQ96BT3 561 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 KLHDC7BQ96G42 594 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 TSGA13Q96PP4 275 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 NUDCD1Q96RS6 583 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 ATP13A3Q9H7F0 1226 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 NOD2Q9HC29 1040 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 DTLQ9NZJ0 730 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 ALG6Q9Y672 507 aa15.39■□□□□ 0.05
PRKN-201ENST00000338468 LRRK1Q38SD2 2015 aa15.38■□□□□ 0.05
PRKN-201ENST00000338468 A0A0A6YYK5 440 aaPredicted RBP15.38■□□□□ 0.05
PRKN-201ENST00000338468 FAM221BA6H8Z2 402 aa15.38■□□□□ 0.05
PRKN-201ENST00000338468 RIOK3O14730 519 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms