RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 WSCD2Q2TBF2 565 aa17.22■□□□□ 0.35
VSTM1-201ENST00000338372 ERMARDQ5T6L9 678 aa17.22■□□□□ 0.35
VSTM1-201ENST00000338372 KCTD16Q68DU8 428 aa17.22■□□□□ 0.35
VSTM1-201ENST00000338372 ZCCHC8Q6NZY4 707 aaKnown RBP17.22■□□□□ 0.35
VSTM1-201ENST00000338372 ARHGAP36Q6ZRI8 547 aa17.22■□□□□ 0.35
VSTM1-201ENST00000338372 VPS36Q86VN1 386 aa17.22■□□□□ 0.35
VSTM1-201ENST00000338372 NPWQ8N729 165 aa17.22■□□□□ 0.35
VSTM1-201ENST00000338372 ECHDC3Q96DC8 303 aa17.22■□□□□ 0.35
VSTM1-201ENST00000338372 CELF6Q96J87 481 aaKnown RBP17.22■□□□□ 0.35
VSTM1-201ENST00000338372 TBATAQ96M53 351 aa17.22■□□□□ 0.35
VSTM1-201ENST00000338372 SUV39H2Q9H5I1 410 aa17.22■□□□□ 0.35
VSTM1-201ENST00000338372 UBA2Q9UBT2 640 aaPredicted RBP17.22■□□□□ 0.35
VSTM1-201ENST00000338372 COQ6Q9Y2Z9 468 aa17.22■□□□□ 0.35
VSTM1-201ENST00000338372 ARHGEF17Q96PE2 2063 aaPredicted RBP17.22■□□□□ 0.35
VSTM1-201ENST00000338372 EIF3CLB5ME19 914 aaKnown RBP17.21■□□□□ 0.35
VSTM1-201ENST00000338372 NEMP1O14524 444 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 TOR1BO14657 336 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 RIOK3O14730 519 aaKnown RBP17.21■□□□□ 0.35
VSTM1-201ENST00000338372 MUSKO15146 869 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 LRCH4O75427 683 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 FTLP02792 175 aaPredicted RBP17.21■□□□□ 0.35
VSTM1-201ENST00000338372 CCDC172P0C7W6 258 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 ERCC2P18074 760 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 TGM2P21980 687 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 HCAR3P49019 387 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 SUOXP51687 545 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 TPI1P60174 286 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 RAD51Q06609 339 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 DPYSQ14117 519 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 IRF4Q15306 451 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 DEFB133Q30KQ1 61 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 HGSNATQ68CP4 663 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 GUSBP11Q6P575 273 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 TSEN2Q8NCE0 465 aaKnown RBP17.21■□□□□ 0.35
VSTM1-201ENST00000338372 EIF3CQ99613 913 aaKnown RBP17.21■□□□□ 0.35
VSTM1-201ENST00000338372 LRRC61Q9BV99 259 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 ISCUQ9H1K1 167 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 PRORYQ9H606 182 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 PCDH12Q9NPG4 1184 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 CWC15Q9P013 229 aaKnown RBP17.21■□□□□ 0.35
VSTM1-201ENST00000338372 PCSK1NQ9UHG2 260 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 RAI2Q9Y5P3 530 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 AK5Q9Y6K8 562 aa17.21■□□□□ 0.35
VSTM1-201ENST00000338372 EEF2KO00418 725 aaKnown RBP17.2■□□□□ 0.34
VSTM1-201ENST00000338372 TRAFD1O14545 582 aaPredicted RBP17.2■□□□□ 0.34
VSTM1-201ENST00000338372 DXOO77932 396 aaKnown RBP17.2■□□□□ 0.34
VSTM1-201ENST00000338372 PEX11BO96011 259 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 CELA2BP08218 269 aaPredicted RBP17.2■□□□□ 0.34
VSTM1-201ENST00000338372 ALPPL2P10696 532 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 TCF4P15884 667 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 PSMA2P25787 234 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 IL1R2P27930 398 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 EIF4A3P38919 411 aaKnown RBP17.2■□□□□ 0.34
VSTM1-201ENST00000338372 MMP12P39900 470 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 PBX1P40424 430 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 RALGDSQ12967 914 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 PERM1Q5SV97 790 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 PPP1R2P3Q6NXS1 205 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 MACC1Q6ZN28 852 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 RFX8Q6ZV50 586 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 SRLQ86TD4 932 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 CAMK1DQ8IU85 385 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 SLC35F3Q8IY50 421 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 PHACTR4Q8IZ21 702 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 IFI44Q8TCB0 444 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 LMX1AQ8TE12 382 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 PRR11Q96HE9 360 aaPredicted RBP17.2■□□□□ 0.34
VSTM1-201ENST00000338372 HIC2Q96JB3 615 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 ZNF641Q96N77 438 aaPredicted RBP17.2■□□□□ 0.34
VSTM1-201ENST00000338372 WRAP53Q9BUR4 548 aaKnown RBP17.2■□□□□ 0.34
VSTM1-201ENST00000338372 EDEM3Q9BZQ6 932 aa17.2■□□□□ 0.34
VSTM1-201ENST00000338372 DHX35Q9H5Z1 703 aaKnown RBP17.2■□□□□ 0.34
VSTM1-201ENST00000338372 ATMQ13315 3056 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 SCN8AQ9UQD0 1980 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 ANKRD62A6NC57 917 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 LMO7DNF2Z398 122 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 YY2O15391 372 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 SKILP12757 684 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 C6P13671 934 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 PEX5P50542 639 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 DUSP3P51452 185 aaPredicted RBP17.19■□□□□ 0.34
VSTM1-201ENST00000338372 ADKP55263 362 aaKnown RBP17.19■□□□□ 0.34
VSTM1-201ENST00000338372 C1orf61Q13536 156 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 CDKN3Q16667 212 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 TBC1D25Q3MII6 688 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 ZNF354CQ86Y25 554 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 PSTKQ8IV42 348 aaKnown RBP17.19■□□□□ 0.34
VSTM1-201ENST00000338372 CXorf40AQ8TE69 158 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 BTN2A2Q8WVV5 523 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 SPOCK2Q92563 424 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 FGF11Q92914 225 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 DCBLD2Q96PD2 775 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 ETNK2Q9NVF9 386 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 IPO11Q9UI26 975 aaKnown RBP17.19■□□□□ 0.34
VSTM1-201ENST00000338372 SSUH2Q9Y2M2 353 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 KALRNO60229 2985 aa17.19■□□□□ 0.34
VSTM1-201ENST00000338372 GOLGA6L22H0YM25 854 aa17.18■□□□□ 0.34
VSTM1-201ENST00000338372 H3BM21 787 aa17.18■□□□□ 0.34
VSTM1-201ENST00000338372 PRKCGP05129 697 aa17.18■□□□□ 0.34
VSTM1-201ENST00000338372 TSHRP16473 764 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms