RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 TMEM216Q9P0N5 145 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 BCL9LQ86UU0 1499 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 BCLAF3A2AJT9 711 aaKnown RBP13.84□□□□□ -0.19
RTN4-202ENST00000337526 MAGEC1O60732 1142 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 SMIM10L2AP0DMW4 78 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 SMIM10L2BP0DMW5 78 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 DARSP14868 501 aaKnown RBP13.84□□□□□ -0.19
RTN4-202ENST00000337526 TCF3P15923 654 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 POLR2LP62875 67 aaKnown RBP13.84□□□□□ -0.19
RTN4-202ENST00000337526 PURAQ00577 322 aaKnown RBP13.84□□□□□ -0.19
RTN4-202ENST00000337526 DPP10Q8N608 796 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 CENPIQ92674 756 aaPredicted RBP13.84□□□□□ -0.19
RTN4-202ENST00000337526 CLK4Q9HAZ1 481 aaKnown RBP13.84□□□□□ -0.19
RTN4-202ENST00000337526 RSL24D1Q9UHA3 163 aaKnown RBP13.84□□□□□ -0.19
RTN4-202ENST00000337526 PCDHGC3Q9UN70 934 aa13.84□□□□□ -0.19
RTN4-202ENST00000337526 RNASEH1O60930 286 aaKnown RBP13.83□□□□□ -0.19
RTN4-202ENST00000337526 SIN3BO75182 1162 aa13.83□□□□□ -0.19
RTN4-202ENST00000337526 LINC00032P0C843 101 aa13.83□□□□□ -0.19
RTN4-202ENST00000337526 TSNQ15631 228 aaKnown RBP13.83□□□□□ -0.19
RTN4-202ENST00000337526 TIMM50Q3ZCQ8 353 aa13.83□□□□□ -0.19
RTN4-202ENST00000337526 PPM1JQ5JR12 505 aa13.83□□□□□ -0.19
RTN4-202ENST00000337526 FGD2Q7Z6J4 655 aa13.83□□□□□ -0.19
RTN4-202ENST00000337526 FAM35AQ86V20 835 aa13.83□□□□□ -0.19
RTN4-202ENST00000337526 TMEM106CQ9BVX2 250 aa13.83□□□□□ -0.19
RTN4-202ENST00000337526 NXF3Q9H4D5 531 aaKnown RBP13.83□□□□□ -0.19
RTN4-202ENST00000337526 ADAM30Q9UKF2 790 aa13.83□□□□□ -0.19
RTN4-202ENST00000337526 ATP6V0D1P61421 351 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 NAA20P61599 178 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 USP46P62068 366 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 RPL38P63173 70 aaKnown RBP13.83□□□□□ -0.2
RTN4-202ENST00000337526 TOP3AQ13472 1001 aaPredicted RBP13.83□□□□□ -0.2
RTN4-202ENST00000337526 KHDC1Q4VXA5 237 aaKnown RBP13.83□□□□□ -0.2
RTN4-202ENST00000337526 TRIQKQ629K1 86 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 C1orf127Q8N9H9 656 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 FAM47BQ8NA70 645 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 ADCY4Q8NFM4 1077 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 EXOC2Q96KP1 924 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 TM6SF2Q9BZW4 377 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 GLOD4Q9HC38 313 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 LIN7AO14910 233 aaPredicted RBP13.83□□□□□ -0.2
RTN4-202ENST00000337526 MYL12AP19105 171 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 TIGD2Q4W5G0 525 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 RINLQ6ZS11 566 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 CUZD1Q86UP6 607 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 ZBTB46Q86UZ6 589 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 WDR36Q8NI36 951 aaKnown RBP13.83□□□□□ -0.2
RTN4-202ENST00000337526 EPB41L4BQ9H329 900 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 BPIFA1Q9NP55 256 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 CHRAC1Q9NRG0 131 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 RCOR3Q9P2K3 495 aaPredicted RBP13.83□□□□□ -0.2
RTN4-202ENST00000337526 SNX6Q9UNH7 406 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 EFCAB10A6NFE3 127 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 WBP4O75554 376 aaKnown RBP13.83□□□□□ -0.2
RTN4-202ENST00000337526 CLTBP09497 229 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 IDO1P14902 403 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 RGS21Q2M5E4 152 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 PRAMEF19Q5SWL8 479 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 RNF220Q5VTB9 566 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 GPR107Q5VW38 600 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 AFTPHQ6ULP2 937 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 ZDHHC24Q6UX98 284 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 ADAMTSL2Q86TH1 951 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 EPHX4Q8IUS5 362 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 CDK20Q8IZL9 346 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 PROX1Q92786 737 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 ZNF180Q9UJW8 692 aa13.83□□□□□ -0.2
RTN4-202ENST00000337526 MOXD2PA6NHM9 499 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 KPNA3O00505 521 aaPredicted RBP13.82□□□□□ -0.2
RTN4-202ENST00000337526 POLD2P49005 469 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 AIF1P55008 147 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 LSM3P62310 102 aaKnown RBP13.82□□□□□ -0.2
RTN4-202ENST00000337526 TGM3Q08188 693 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 MTSS1LQ765P7 747 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 AMER2Q8N7J2 671 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 REPS1Q96D71 796 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 SSU72Q9NP77 194 aaKnown RBP13.82□□□□□ -0.2
RTN4-202ENST00000337526 ETAA1Q9NY74 926 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 ZNHIT2Q9UHR6 403 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 GMPPBQ9Y5P6 360 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 SCAMP3O14828 347 aaKnown RBP13.82□□□□□ -0.2
RTN4-202ENST00000337526 VAV1P15498 845 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 PAICSP22234 425 aaKnown RBP13.82□□□□□ -0.2
RTN4-202ENST00000337526 HPCAL1P37235 193 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 PPIL2Q13356 520 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 CYP1B1Q16678 543 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 INTS11Q5TA45 600 aaKnown RBP13.82□□□□□ -0.2
RTN4-202ENST00000337526 VWA5B1Q5TIE3 1220 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 C9orf57Q5W0N0 161 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 KRT73Q86Y46 540 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 TFAP2BQ92481 460 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 LPPQ93052 612 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 RAD21L1Q9H4I0 556 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 CDH22Q9UJ99 828 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 COQ4Q9Y3A0 265 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 MYL12BO14950 172 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 CST1P01037 141 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 CKBP12277 381 aa13.82□□□□□ -0.2
RTN4-202ENST00000337526 LPOP22079 712 aaPredicted RBP13.82□□□□□ -0.2
RTN4-202ENST00000337526 SKIV2LQ15477 1246 aaKnown RBP13.82□□□□□ -0.2
RTN4-202ENST00000337526 ARL13AQ5H913 290 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms