RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 TUBA3EQ6PEY2 450 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 UBE2Q1Q7Z7E8 422 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 NAT16Q8N8M0 369 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 RP9Q8TA86 221 aaKnown RBP16.18■□□□□ 0.18
NPHP3-201ENST00000337331 SPATA13Q96N96 652 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 WDR6Q9NNW5 1121 aaKnown RBP16.18■□□□□ 0.18
NPHP3-201ENST00000337331 IMPAD1Q9NX62 359 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 MED26O95402 600 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 TGFB2P61812 414 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 NT5DC4Q86YG4 428 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 PCDHAC1Q9H158 963 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 ZDHHC7Q9NXF8 308 aa16.18■□□□□ 0.18
NPHP3-201ENST00000337331 A6NL46 340 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 HACD1B0YJ81 288 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 BMP10O95393 424 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 CLIC3O95833 236 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 LTFP02788 710 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 FUCA1P04066 466 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 HOXD13P35453 343 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 ECT2LQ008S8 904 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 EEF1DP3Q658K8 133 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 SDE2Q6IQ49 451 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 UNC5AQ6ZN44 842 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 CYP4V2Q6ZWL3 525 aaPredicted RBP16.17■□□□□ 0.18
NPHP3-201ENST00000337331 PHTF2Q8N3S3 785 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 LPGAT1Q92604 370 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 PROX1Q92786 737 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 PRDM12Q9H4Q4 367 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 HPS4Q9NQG7 708 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 INIPQ9NRY2 104 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 MYPNQ86TC9 1320 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 RAMP2O60895 175 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 LDLRP01130 860 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 KRT6AP02538 564 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 KRT6BP04259 564 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 IFI30P13284 250 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 SOAT1P35610 550 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 ALDH7A1P49419 539 aaKnown RBP16.17■□□□□ 0.18
NPHP3-201ENST00000337331 HNRNPDQ14103 355 aaKnown RBP16.17■□□□□ 0.18
NPHP3-201ENST00000337331 RHBDF2Q6PJF5 856 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 COLEC11Q9BWP8 271 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 XPNPEP3Q9NQH7 507 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 VTI1BQ9UEU0 232 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 EGFL7Q9UHF1 273 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 CPA4Q9UI42 421 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 ADSSP30520 456 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 NR4A2P43354 598 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 NDST2P52849 883 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 FAM183BPQ6ZVS7 135 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 LRRC8DQ7L1W4 858 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 PRKD2Q9BZL6 878 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 TKTL2Q9H0I9 626 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 RGS18Q9NS28 235 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 POU2F3Q9UKI9 436 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 CXCL11O14625 94 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 TBX1O43435 398 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 CKMP06732 381 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 USP17L7P0C7H9 530 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 ADCYAP1R1P41586 468 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 PRIM2P49643 509 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 IDH3AP50213 366 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 TATDN1Q6P1N9 297 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 C12orf56Q8IXR9 622 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 KBTBD7Q8WVZ9 684 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 WNT8BQ93098 351 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 TMEM169Q96HH4 297 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 RNF145Q96MT1 663 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 ADI1Q9BV57 179 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 POPDC2Q9HBU9 364 aa16.17■□□□□ 0.18
NPHP3-201ENST00000337331 TSPAN4O14817 238 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 TRUB2O95900 331 aaKnown RBP16.16■□□□□ 0.18
NPHP3-201ENST00000337331 AOC1P19801 751 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 MZF1P28698 734 aaPredicted RBP16.16■□□□□ 0.18
NPHP3-201ENST00000337331 IL5RAQ01344 420 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 TRAF3Q13114 568 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 SAMD4BQ5PRF9 694 aaKnown RBP16.16■□□□□ 0.18
NPHP3-201ENST00000337331 RNASEH2BQ5TBB1 312 aaKnown RBP16.16■□□□□ 0.18
NPHP3-201ENST00000337331 MID1IP1Q9NPA3 183 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 AURKAO14965 403 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 LGALS2P05162 132 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 NOS2P35228 1153 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 DGKZQ13574 1117 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 NEPROQ6NW34 567 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 MFSD14AQ96MC6 490 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 ABHD16BQ9H3Z7 469 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 ACTR8Q9H981 624 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 VPS28Q9UK41 221 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 TNFSF13BQ9Y275 285 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 FMN2Q9NZ56 1722 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 CLPXO76031 633 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 PRLP01236 227 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 RHOCP08134 193 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 ADORA2AP29274 412 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 GAD2Q05329 585 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 ANKS6Q68DC2 871 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 PIGZQ86VD9 579 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 RAB42Q8N4Z0 105 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 GALNT6Q8NCL4 622 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 JOSD2Q8TAC2 188 aa16.16■□□□□ 0.18
NPHP3-201ENST00000337331 PGLYRP2Q96PD5 576 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms