RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SCML2Q9UQR0 700 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 SSX2IPQ9Y2D8 614 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 PCDHGC4Q9Y5F7 938 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 ZFP37Q9Y6Q3 630 aaPredicted RBP8.92□□□□□ -0.98
SNCA-201ENST00000336904 PATJQ8NI35 1801 aa8.92□□□□□ -0.98
SNCA-201ENST00000336904 ERI2A8K979 691 aaKnown RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 CBX4O00257 560 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 NVLO15381 856 aaKnown RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 FGF10O15520 208 aaPredicted RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 GRID2O43424 1007 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 OAZ2O95190 189 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 ALDH2P05091 517 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 MPOP05164 745 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 UBTFL6P0CB48 400 aaPredicted RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 TFEBP19484 476 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 TYMPP19971 482 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 GRK2P25098 689 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 CYP2C18P33260 490 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 HARS2P49590 506 aaKnown RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 SLC12A1Q13621 1099 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 WASHC2DQ5SRD0 308 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 SPOUT1Q5T280 376 aaKnown RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 LHX8Q68G74 356 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 TMA16Q96EY4 203 aaKnown RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 ILKAPQ9H0C8 392 aaPredicted RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 DCLRE1BQ9H816 532 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 FBRSL1Q9HCM7 1045 aaKnown RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 CREBZFQ9NS37 354 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 GMPR2Q9P2T1 348 aaKnown RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 THSD7BQ9C0I4 1608 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 C2orf78A6NCI8 922 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 BNIP3LO60238 219 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 CIB2O75838 187 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 TM7SF2O76062 418 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 COX4I1P13073 169 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 TBL3Q12788 808 aaKnown RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 KLF10Q13118 480 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 PLD1Q13393 1074 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 ZNF235Q14590 738 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 EPGNQ6UW88 154 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 ZYG11AQ6WRX3 759 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 RNF111Q6ZNA4 994 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 GK5Q6ZS86 529 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 TRIM67Q6ZTA4 783 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 ZNF683Q8IZ20 524 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 OR9I1Q8NGQ6 314 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 DNAJC9Q8WXX5 260 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 RCN3Q96D15 328 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 RMDN1Q96DB5 314 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 CCDC97Q96F63 343 aaPredicted RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 GPR78Q96P69 363 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 CASD1Q96PB1 797 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 TSGA13Q96PP4 275 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 MCMBPQ9BTE3 642 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 TREX1Q9NSU2 369 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 SNAP91O60641 907 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 GKP32189 559 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 NFE2Q16621 373 aaPredicted RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 PLA2G4EQ3MJ16 856 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 MAP3K21Q5TCX8 1036 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 LIPMQ5VYY2 423 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 SEL1L3Q68CR1 1132 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 SCIMPQ6UWF3 145 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 PCDH20Q8N6Y1 951 aaKnown RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 IFT43Q96FT9 208 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 IMP4Q96G21 291 aaKnown RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 UROC1Q96N76 676 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 NSUN5Q96P11 429 aaKnown RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 KCNA7Q96RP8 456 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 SLC39A3Q9BRY0 314 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 GPBP1L1Q9HC44 474 aaPredicted RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 TRPC7Q9HCX4 862 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 SARS2Q9NP81 518 aaKnown RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 PRDM5Q9NQX1 630 aaPredicted RBP8.91□□□□□ -0.98
SNCA-201ENST00000336904 ENTPD7Q9NQZ7 604 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 SPO11Q9Y5K1 396 aa8.91□□□□□ -0.98
SNCA-201ENST00000336904 DOCK6Q96HP0 2047 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 KIAA0100Q14667 2235 aaKnown RBP8.9□□□□□ -0.98
SNCA-201ENST00000336904 A0A1B0GTL3 188 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 MAGEB16A2A368 324 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 GOT2P00505 430 aaKnown RBP8.9□□□□□ -0.98
SNCA-201ENST00000336904 IL1BP01584 269 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 KLKB1P03952 638 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 PAX7P23759 505 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 RPL14P50914 215 aaKnown RBP8.9□□□□□ -0.98
SNCA-201ENST00000336904 RENBPP51606 427 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 CSE1LP55060 971 aaKnown RBP8.9□□□□□ -0.98
SNCA-201ENST00000336904 C1QTNF8P60827 252 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 ECT2LQ008S8 904 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 IRF5Q13568 498 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 LBRQ14739 615 aaKnown RBP8.9□□□□□ -0.98
SNCA-201ENST00000336904 GEN1Q17RS7 908 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 PITRM1Q5JRX3 1037 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 HECTD2Q5U5R9 776 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 RPAINQ86UA6 219 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 ARRDC2Q8TBH0 407 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 STYXQ8WUJ0 223 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 SLC22A12Q96S37 553 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 SLC25A51Q9H1U9 297 aa8.9□□□□□ -0.98
SNCA-201ENST00000336904 ABCG8Q9H221 673 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms