RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 TMCC2O75069 709 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 SNX4O95219 450 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 CAPGP40121 348 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 IDH2P48735 452 aaKnown RBP13.17□□□□□ -0.3
HLCS-201ENST00000336648 SLC12A3P55017 1021 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 PFKFB4Q16877 469 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 RPTNQ6XPR3 784 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 PIK3C3Q8NEB9 887 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 SPATA20Q8TB22 786 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 FBXO30Q8TB52 745 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 ZSCAN18Q8TBC5 510 aaPredicted RBP13.17□□□□□ -0.3
HLCS-201ENST00000336648 ITCHQ96J02 903 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 CITED4Q96RK1 184 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 TBCDQ9BTW9 1192 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 MUC13Q9H3R2 512 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 GPN1Q9HCN4 374 aaPredicted RBP13.17□□□□□ -0.3
HLCS-201ENST00000336648 OR12D3Q9UGF7 316 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 POLLQ9UGP5 575 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 DNMT3LQ9UJW3 386 aa13.17□□□□□ -0.3
HLCS-201ENST00000336648 STX16-NPEPL1H3BU86 382 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 KPNA3O00505 521 aaPredicted RBP13.16□□□□□ -0.3
HLCS-201ENST00000336648 STX16O14662 325 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 ZNF286BP0CG31 522 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 CSH1P0DML2 217 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 CSH2P0DML3 217 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 RPA3P35244 121 aaPredicted RBP13.16□□□□□ -0.3
HLCS-201ENST00000336648 CCR4P51679 360 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 RAB10P61026 200 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 RPL19P84098 196 aaKnown RBP13.16□□□□□ -0.3
HLCS-201ENST00000336648 ZDHHC20Q5W0Z9 365 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 MARK2Q7KZI7 788 aaKnown RBP13.16□□□□□ -0.3
HLCS-201ENST00000336648 IQCF2Q8IXL9 164 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 ELMO1Q92556 727 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 NUDT5Q9UKK9 219 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 TNFSF13BQ9Y275 285 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 PSMD11O00231 422 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 PLOD3O60568 738 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 WFS1O76024 890 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 NFKB1P19838 968 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 OMPP47874 163 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 ARPC4P59998 168 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 CAMK1Q14012 370 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 GPRIN3Q6ZVF9 776 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 PHF10Q8WUB8 498 aaKnown RBP13.16□□□□□ -0.3
HLCS-201ENST00000336648 MLXQ9UH92 298 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 RAPGEFL1Q9UHV5 662 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 LIN7AO14910 233 aaPredicted RBP13.16□□□□□ -0.3
HLCS-201ENST00000336648 RGS1Q08116 209 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 DGCR6Q14129 220 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 SLC39A12Q504Y0 691 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 MBOAT7Q96N66 472 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 CEP41Q9BYV8 373 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.16□□□□□ -0.3
HLCS-201ENST00000336648 CCNDBP1O95273 360 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 FAM153BP0C7A2 387 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 MYBL2P10244 700 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 FAUP35544 74 aaKnown RBP13.16□□□□□ -0.3
HLCS-201ENST00000336648 GABRB2P47870 512 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 PDK3Q15120 406 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 TYSND1Q2T9J0 566 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 FAM153CQ494X1 144 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 LIPMQ5VYY2 423 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 PHF13Q86YI8 300 aaPredicted RBP13.16□□□□□ -0.3
HLCS-201ENST00000336648 ZNF248Q8NDW4 579 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 KBTBD7Q8WVZ9 684 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 ZYG11BQ9C0D3 744 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 MAGEL2Q9UJ55 1249 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 ZNF221Q9UK13 617 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 ABLIM1O14639 778 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 UGT1A5P35504 534 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 RALGDSQ12967 914 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 MAMLD1Q13495 774 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 FSCN1Q16658 493 aaKnown RBP13.16□□□□□ -0.3
HLCS-201ENST00000336648 RFTN2Q52LD8 501 aaPredicted RBP13.16□□□□□ -0.3
HLCS-201ENST00000336648 HECTD3Q5T447 861 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 SLC9A9Q8IVB4 645 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 REXO5Q96IC2 774 aaKnown RBP13.16□□□□□ -0.3
HLCS-201ENST00000336648 SENP8Q96LD8 212 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 UNKQ9C0B0 810 aaKnown RBP13.16□□□□□ -0.3
HLCS-201ENST00000336648 SEMA6AQ9H2E6 1030 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 ASB8Q9H765 288 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 CHST7Q9NS84 486 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 SSR3Q9UNL2 185 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 ST3GAL5Q9UNP4 418 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 ABCA6Q8N139 1617 aa13.16□□□□□ -0.3
HLCS-201ENST00000336648 SLIT1O75093 1534 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 TRAV19A0A0A6YYK7 116 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 PSIP1O75475 530 aaKnown RBP13.15□□□□□ -0.3
HLCS-201ENST00000336648 EPHX2P34913 555 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 GRIA3P42263 894 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 VBP1P61758 197 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 DPYSQ14117 519 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 ERICH5Q6P6B1 374 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 ZCCHC23Q6ZST2 131 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 ZSWIM2Q8NEG5 633 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 ART4Q93070 314 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 ZHX1-C8orf76Q96EF9 292 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 ATXN10Q9UBB4 475 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 LYVE1Q9Y5Y7 322 aa13.15□□□□□ -0.3
HLCS-201ENST00000336648 PTCH2Q9Y6C5 1203 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms