RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CEP70Q8NHQ1 597 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 ANKRD49Q8WVL7 239 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 MYLPFQ96A32 169 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 EME1Q96AY2 570 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 GLOD4Q9HC38 313 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 IGSF5Q9NSI5 407 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 TMLHEQ9NVH6 421 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 GIMAP2Q9UG22 337 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 VPS28Q9UK41 221 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 FBXO5Q9UKT4 447 aa12.42□□□□□ -0.42
VPS33B-201ENST00000333371 KLHL33A6NCF5 533 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 ZNF26P17031 533 aaPredicted RBP12.41□□□□□ -0.42
VPS33B-201ENST00000333371 LRPAP1P30533 357 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 MAXP61244 160 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 BTBD8Q5XKL5 378 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 PM20D1Q6GTS8 502 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 TAF2Q6P1X5 1199 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 ZFP1Q6P2D0 407 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 ARHGAP22Q7Z5H3 698 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 SETD3Q86TU7 594 aaPredicted RBP12.41□□□□□ -0.42
VPS33B-201ENST00000333371 PELI3Q8N2H9 469 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 PPHLN1Q8NEY8 458 aaKnown RBP12.41□□□□□ -0.42
VPS33B-201ENST00000333371 ADCY4Q8NFM4 1077 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 B4GALNT2Q8NHY0 566 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 LPGAT1Q92604 370 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 DGCR14Q96DF8 476 aaKnown RBP12.41□□□□□ -0.42
VPS33B-201ENST00000333371 LRCH3Q96II8 777 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 MAELQ96JY0 434 aaKnown RBP12.41□□□□□ -0.42
VPS33B-201ENST00000333371 TSPAN18Q96SJ8 248 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 VAT1Q99536 393 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 SLC29A1Q99808 456 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 MRPL1Q9BYD6 325 aaKnown RBP12.41□□□□□ -0.42
VPS33B-201ENST00000333371 SENP6Q9GZR1 1112 aaPredicted RBP12.41□□□□□ -0.42
VPS33B-201ENST00000333371 NCKIPSDQ9NZQ3 722 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 TCAF1Q9Y4C2 921 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 HEMK1Q9Y5R4 338 aaPredicted RBP12.41□□□□□ -0.42
VPS33B-201ENST00000333371 PTGDR2Q9Y5Y4 395 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 RAD54BQ9Y620 910 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 TANC1Q9C0D5 1861 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 A8MT66 165 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 H3BSA7 217 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 MAFKO60675 156 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 CPB1P15086 417 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 CD151P48509 253 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 KCNC1P48547 511 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 AIF1P55008 147 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 YBX1P67809 324 aaKnown RBP12.41□□□□□ -0.42
VPS33B-201ENST00000333371 FASTKQ14296 549 aaKnown RBP12.41□□□□□ -0.42
VPS33B-201ENST00000333371 MTX3Q5HYI7 312 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 REP15Q6BDI9 236 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 LINC00523Q86TU6 105 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 MYO1HQ8N1T3 1032 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 EZH1Q92800 747 aaPredicted RBP12.41□□□□□ -0.42
VPS33B-201ENST00000333371 EXT2Q93063 718 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 SLCO4A1Q96BD0 722 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 TMIGD2Q96BF3 282 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 PGAP3Q96FM1 320 aaPredicted RBP12.41□□□□□ -0.42
VPS33B-201ENST00000333371 HIC2Q96JB3 615 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 MRGPRX2Q96LB1 330 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 CIB1Q99828 191 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 FSD1LQ9BXM9 530 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 RBM38Q9H0Z9 239 aaKnown RBP12.41□□□□□ -0.42
VPS33B-201ENST00000333371 Q9H521 79 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 RBM22Q9NW64 420 aaKnown RBP eCLIP12.41□□□□□ -0.42
VPS33B-201ENST00000333371 RNF11Q9Y3C5 154 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 SNX13Q9Y5W8 968 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 PLOD2O00469 737 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 TRIM38O00635 465 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 UBFD1O14562 309 aaKnown RBP12.41□□□□□ -0.42
VPS33B-201ENST00000333371 FAM58BPP0C7Q3 252 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 CCDC166P0CW27 439 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 HADHAP40939 763 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 SLC12A2P55011 1212 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 HERC3Q15034 1050 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 INTS6LQ5JSJ4 861 aaKnown RBP12.41□□□□□ -0.42
VPS33B-201ENST00000333371 DCLRE1AQ6PJP8 1040 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 CNTN4Q8IWV2 1026 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 RTP3Q9BQQ7 232 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 TRIM8Q9BZR9 551 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 IL1RL2Q9HB29 575 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 CACNA2D2Q9NY47 1150 aa12.41□□□□□ -0.42
VPS33B-201ENST00000333371 hCG_2014768A0A024R1R8 64 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 MYADML2A6NDP7 307 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 OR51F1A6NGY5 319 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 SLCO1B7G3V0H7 640 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 PPP6CO00743 305 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 PAGE1O75459 146 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 TNFAIP8O95379 198 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 CTSHP09668 335 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 BRCC3P46736 316 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 SCNN1GP51170 649 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 MRPS6P82932 125 aaKnown RBP12.4□□□□□ -0.42
VPS33B-201ENST00000333371 CRHR2Q13324 411 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 TIGD5Q53EQ6 642 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 TECRLQ5HYJ1 363 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 NEPROQ6NW34 567 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 CUZD1Q86UP6 607 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 PIM3Q86V86 326 aa12.4□□□□□ -0.42
VPS33B-201ENST00000333371 C2CD4AQ8NCU7 369 aaPredicted RBP12.4□□□□□ -0.42
VPS33B-201ENST00000333371 RNF217Q8TC41 542 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms