RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 BCLAF3A2AJT9 711 aaKnown RBP20.71■□□□□ 0.91
MRPL40-201ENST00000333130 AP1G1O43747 822 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 FOXD2O60548 495 aaPredicted RBP20.71■□□□□ 0.91
MRPL40-201ENST00000333130 STK10O94804 968 aaKnown RBP20.71■□□□□ 0.91
MRPL40-201ENST00000333130 PCDH8O95206 1070 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 SERPINF2P08697 491 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 CR2P20023 1033 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 CASQ1P31415 396 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 NUDT1P36639 197 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 MPLP40238 635 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 CCR5P51681 352 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 ELP6Q0PNE2 266 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 ZBTB17Q13105 803 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 LONRF2Q1L5Z9 754 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 ERAP2Q6P179 960 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 DRICH1Q6PGQ1 229 aaPredicted RBP20.71■□□□□ 0.91
MRPL40-201ENST00000333130 B4GALNT4Q76KP1 1039 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 ASCL5Q7RTU5 278 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 SLC41A1Q8IVJ1 513 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 GPR161Q8N6U8 529 aaKnown RBP20.71■□□□□ 0.91
MRPL40-201ENST00000333130 ATG4AQ8WYN0 398 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 PIGKQ92643 395 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 VAT1Q99536 393 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 ARRDC1-AS1Q9H2J1 176 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 DNPEPQ9ULA0 475 aa20.71■□□□□ 0.91
MRPL40-201ENST00000333130 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.71■□□□□ 0.91
MRPL40-201ENST00000333130 EP300Q09472 2414 aaPredicted RBP20.71■□□□□ 0.91
MRPL40-201ENST00000333130 USP34Q70CQ2 3546 aa20.7■□□□□ 0.9
MRPL40-201ENST00000333130 KIF2AO00139 706 aaPredicted RBP20.7■□□□□ 0.9
MRPL40-201ENST00000333130 LIASO43766 372 aa20.7■□□□□ 0.9
MRPL40-201ENST00000333130 HLA-DQB2P05538 268 aa20.7■□□□□ 0.9
MRPL40-201ENST00000333130 ITPKAP23677 461 aa20.7■□□□□ 0.9
MRPL40-201ENST00000333130 PTPN3P26045 913 aa20.7■□□□□ 0.9
MRPL40-201ENST00000333130 WASHC5Q12768 1159 aa20.7■□□□□ 0.9
MRPL40-201ENST00000333130 OASLQ15646 514 aaKnown RBP20.7■□□□□ 0.9
MRPL40-201ENST00000333130 CCNG2Q16589 344 aa20.7■□□□□ 0.9
MRPL40-201ENST00000333130 CAMK1DQ8IU85 385 aa20.7■□□□□ 0.9
MRPL40-201ENST00000333130 CREG2Q8IUH2 290 aa20.7■□□□□ 0.9
MRPL40-201ENST00000333130 CEP76Q8TAP6 659 aa20.7■□□□□ 0.9
MRPL40-201ENST00000333130 PDCD6IPQ8WUM4 868 aaKnown RBP20.7■□□□□ 0.9
MRPL40-201ENST00000333130 HTR3CQ8WXA8 447 aa20.7■□□□□ 0.9
MRPL40-201ENST00000333130 NOD2Q9HC29 1040 aa20.7■□□□□ 0.9
MRPL40-201ENST00000333130 VPS45Q9NRW7 570 aa20.7■□□□□ 0.9
MRPL40-201ENST00000333130 ATP8A1Q9Y2Q0 1164 aa20.7■□□□□ 0.9
MRPL40-201ENST00000333130 TSPAN11A1L157 253 aa20.69■□□□□ 0.9
MRPL40-201ENST00000333130 UPK3BL1B0FP48 263 aa20.69■□□□□ 0.9
MRPL40-201ENST00000333130 UPK3BL2E5RIL1 263 aa20.69■□□□□ 0.9
MRPL40-201ENST00000333130 TSPAN6O43657 245 aa20.69■□□□□ 0.9
MRPL40-201ENST00000333130 RBL1P28749 1068 aa20.69■□□□□ 0.9
MRPL40-201ENST00000333130 SETMARQ53H47 684 aaPredicted RBP20.69■□□□□ 0.9
MRPL40-201ENST00000333130 TEX44Q53QW1 395 aa20.69■□□□□ 0.9
MRPL40-201ENST00000333130 KIAA1161Q6NSJ0 714 aa20.69■□□□□ 0.9
MRPL40-201ENST00000333130 DARS2Q6PI48 645 aaKnown RBP20.69■□□□□ 0.9
MRPL40-201ENST00000333130 PRPF39Q86UA1 669 aaKnown RBP20.69■□□□□ 0.9
MRPL40-201ENST00000333130 TRIM69Q86WT6 500 aa20.69■□□□□ 0.9
MRPL40-201ENST00000333130 NDUFAF2Q8N183 169 aa20.69■□□□□ 0.9
MRPL40-201ENST00000333130 CNTD1Q8N815 330 aa20.69■□□□□ 0.9
MRPL40-201ENST00000333130 BIRC7Q96CA5 298 aa20.69■□□□□ 0.9
MRPL40-201ENST00000333130 FEM1CQ96JP0 617 aa20.69■□□□□ 0.9
MRPL40-201ENST00000333130 AGAP3Q96P47 875 aa20.69■□□□□ 0.9
MRPL40-201ENST00000333130 MIR1-1HGQ9H1L0 117 aa20.69■□□□□ 0.9
MRPL40-201ENST00000333130 USP29Q9HBJ7 922 aa20.69■□□□□ 0.9
MRPL40-201ENST00000333130 KLHL8Q9P2G9 620 aaPredicted RBP20.69■□□□□ 0.9
MRPL40-201ENST00000333130 PRR5-ARHGAP8B1AHC4 643 aa20.68■□□□□ 0.9
MRPL40-201ENST00000333130 TNNT3P45378 269 aaPredicted RBP20.68■□□□□ 0.9
MRPL40-201ENST00000333130 RPS21P63220 83 aaKnown RBP20.68■□□□□ 0.9
MRPL40-201ENST00000333130 UGP2Q16851 508 aa20.68■□□□□ 0.9
MRPL40-201ENST00000333130 ARMC12Q5T9G4 340 aa20.68■□□□□ 0.9
MRPL40-201ENST00000333130 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.68■□□□□ 0.9
MRPL40-201ENST00000333130 PRELID2Q8N945 189 aa20.68■□□□□ 0.9
MRPL40-201ENST00000333130 C1orf54Q8WWF1 131 aa20.68■□□□□ 0.9
MRPL40-201ENST00000333130 DNASE2BQ8WZ79 361 aa20.68■□□□□ 0.9
MRPL40-201ENST00000333130 C10orf88Q9H8K7 445 aa20.68■□□□□ 0.9
MRPL40-201ENST00000333130 HOMER3Q9NSC5 361 aa20.68■□□□□ 0.9
MRPL40-201ENST00000333130 SMARCAL1Q9NZC9 954 aa20.68■□□□□ 0.9
MRPL40-201ENST00000333130 EIF2B4Q9UI10 523 aaKnown RBP20.68■□□□□ 0.9
MRPL40-201ENST00000333130 PILRBQ9UKJ0 227 aa20.68■□□□□ 0.9
MRPL40-201ENST00000333130 TRHDEQ9UKU6 1024 aa20.68■□□□□ 0.9
MRPL40-201ENST00000333130 FADS3Q9Y5Q0 445 aa20.68■□□□□ 0.9
MRPL40-201ENST00000333130 ATXN2Q99700 1313 aaKnown RBP20.67■□□□□ 0.9
MRPL40-201ENST00000333130 RNF103O00237 685 aa20.67■□□□□ 0.9
MRPL40-201ENST00000333130 RNGTTO60942 597 aaKnown RBP20.67■□□□□ 0.9
MRPL40-201ENST00000333130 CPP00450 1065 aa20.67■□□□□ 0.9
MRPL40-201ENST00000333130 CD27P26842 260 aa20.67■□□□□ 0.9
MRPL40-201ENST00000333130 DEKP35659 375 aaKnown RBP20.67■□□□□ 0.9
MRPL40-201ENST00000333130 TAS2R38P59533 333 aa20.67■□□□□ 0.9
MRPL40-201ENST00000333130 DSC2Q02487 901 aa20.67■□□□□ 0.9
MRPL40-201ENST00000333130 CYP1B1Q16678 543 aa20.67■□□□□ 0.9
MRPL40-201ENST00000333130 DUOXA1Q1HG43 343 aa20.67■□□□□ 0.9
MRPL40-201ENST00000333130 HORMAD1Q86X24 394 aa20.67■□□□□ 0.9
MRPL40-201ENST00000333130 C12orf50Q8NA57 414 aaPredicted RBP20.67■□□□□ 0.9
MRPL40-201ENST00000333130 CXorf40AQ8TE69 158 aa20.67■□□□□ 0.9
MRPL40-201ENST00000333130 ECHDC3Q96DC8 303 aa20.67■□□□□ 0.9
MRPL40-201ENST00000333130 RTP4Q96DX8 246 aa20.67■□□□□ 0.9
MRPL40-201ENST00000333130 TEKT5Q96M29 485 aa20.67■□□□□ 0.9
MRPL40-201ENST00000333130 CEP41Q9BYV8 373 aa20.67■□□□□ 0.9
MRPL40-201ENST00000333130 RNF14Q9UBS8 474 aa20.67■□□□□ 0.9
MRPL40-201ENST00000333130 DMTF1Q9Y222 760 aa20.67■□□□□ 0.9
MRPL40-201ENST00000333130 PCDHGC4Q9Y5F7 938 aa20.67■□□□□ 0.9
MRPL40-201ENST00000333130 PTPRZ1P23471 2315 aaPredicted RBP20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms