RNA–Protein interactions for RNA: ENST00000332772.4

SIMC1-201, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIMC1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-201ENST00000332772 ZYG11AQ6WRX3 759 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 CMC1Q7Z7K0 106 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 TMEM150AQ86TG1 271 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 MTDHQ86UE4 582 aaKnown RBP9.11□□□□□ -0.95
SIMC1-201ENST00000332772 CILP2Q8IUL8 1156 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 OR13J1Q8NGT2 312 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 CCDC126Q96EE4 140 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 MYEOVQ96EZ4 313 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 PAWRQ96IZ0 340 aaKnown RBP9.11□□□□□ -0.95
SIMC1-201ENST00000332772 YME1L1Q96TA2 773 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 RNF38Q9H0F5 515 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 TLE6Q9H808 572 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 IL21Q9HBE4 155 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 POPDC3Q9HBV1 291 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 KLC4Q9NSK0 619 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 OXSMQ9NWU1 459 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 DNAJC28Q9NX36 388 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 IL1RAPL1Q9NZN1 696 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 HAO1Q9UJM8 370 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 DCTN4Q9UJW0 460 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 LSM7Q9UK45 103 aaKnown RBP9.11□□□□□ -0.95
SIMC1-201ENST00000332772 SLC39A10Q9ULF5 831 aa9.11□□□□□ -0.95
SIMC1-201ENST00000332772 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.11□□□□□ -0.95
SIMC1-201ENST00000332772 MTCL1Q9Y4B5 1905 aaKnown RBP9.1□□□□□ -0.95
SIMC1-201ENST00000332772 TRIM43BA6NCK2 446 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 TARM1B6A8C7 271 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 SLCO1B7G3V0H7 640 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 G3V2L1 256 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 TEX28O15482 410 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 FGF18O76093 207 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 PENKP01210 267 aaPredicted RBP9.1□□□□□ -0.95
SIMC1-201ENST00000332772 MYL2P10916 166 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 MBL2P11226 248 aaPredicted RBP9.1□□□□□ -0.95
SIMC1-201ENST00000332772 CALB2P22676 271 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 PTPN4P29074 926 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 CDC25CP30307 473 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 CHRNA4P43681 627 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 SLC12A2P55011 1212 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 RPS24P62847 133 aaKnown RBP9.1□□□□□ -0.95
SIMC1-201ENST00000332772 PRAMEP78395 509 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 SMAD3P84022 425 aaKnown RBP9.1□□□□□ -0.95
SIMC1-201ENST00000332772 ZBTB16Q05516 673 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 PPIGQ13427 754 aaKnown RBP eCLIP9.1□□□□□ -0.95
SIMC1-201ENST00000332772 SEPT6Q14141 434 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 IHHQ14623 411 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 CXorf57Q6NSI4 855 aaKnown RBP9.1□□□□□ -0.95
SIMC1-201ENST00000332772 MRNIPQ6NTE8 343 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 C16orf46Q6P387 395 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 CYB5D1Q6P9G0 228 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 RAPH1Q70E73 1250 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 HTR3DQ70Z44 454 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 CIR1Q86X95 450 aaPredicted RBP9.1□□□□□ -0.95
SIMC1-201ENST00000332772 C10orf107Q8IVU9 208 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 ARID3BQ8IVW6 561 aaPredicted RBP9.1□□□□□ -0.95
SIMC1-201ENST00000332772 CFAP52Q8N1V2 620 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 FIBCD1Q8N539 461 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 SLC25A41Q8N5S1 370 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 MRPS31Q92665 395 aaKnown RBP9.1□□□□□ -0.95
SIMC1-201ENST00000332772 TRIM43Q96BQ3 446 aaPredicted RBP9.1□□□□□ -0.95
SIMC1-201ENST00000332772 HS3ST6Q96QI5 342 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 TCF12Q99081 682 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 MRPL57Q9BQC6 102 aaKnown RBP9.1□□□□□ -0.95
SIMC1-201ENST00000332772 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.1□□□□□ -0.95
SIMC1-201ENST00000332772 HACD3Q9P035 362 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 SLC2A6Q9UGQ3 507 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 APOBEC2Q9Y235 224 aaKnown RBP9.1□□□□□ -0.95
SIMC1-201ENST00000332772 VPS9D1Q9Y2B5 631 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 INSL6Q9Y581 213 aa9.1□□□□□ -0.95
SIMC1-201ENST00000332772 PCNTO95613 3336 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 A0A0D9SEW6 157 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 C2orf78A6NCI8 922 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 GREM1O60565 184 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 RPP40O75818 363 aaKnown RBP9.09□□□□□ -0.95
SIMC1-201ENST00000332772 LUC7L3O95232 432 aaKnown RBP9.09□□□□□ -0.95
SIMC1-201ENST00000332772 ADH1AP07327 375 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 SERPINA6P08185 405 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 RBP1P09455 135 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 T-ENOLP0DO92 83 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 HDCP19113 662 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 CD9P21926 228 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 DDX6P26196 483 aaKnown RBP eCLIP9.09□□□□□ -0.95
SIMC1-201ENST00000332772 MAPK8P45983 427 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 CSNK1DP48730 415 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 DNAJB13P59910 316 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 ELF3P78545 371 aaPredicted RBP9.09□□□□□ -0.95
SIMC1-201ENST00000332772 CTBP1Q13363 440 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 CYTH1Q15438 398 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 TAF1AQ15573 450 aaPredicted RBP9.09□□□□□ -0.95
SIMC1-201ENST00000332772 FAM83EQ2M2I3 478 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 AGAP9Q5VTM2 703 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 LIPMQ5VYY2 423 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 METTL21CQ5VZV1 264 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 FAM45BPQ6NSW5 357 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 DENND6AQ8IWF6 608 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 PLD6Q8N2A8 252 aaKnown RBP9.09□□□□□ -0.95
SIMC1-201ENST00000332772 ELMOD1Q8N336 334 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 TMEM151AQ8N4L1 468 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 DCAF4L2Q8NA75 395 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 OR7D4Q8NG98 312 aa9.09□□□□□ -0.95
SIMC1-201ENST00000332772 TTC8Q8TAM2 541 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms