RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 INVSQ9Y283 1065 aa16.18■□□□□ 0.18
LRRC28-202ENST00000331450 UPK3BL1B0FP48 263 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 UPK3BL2E5RIL1 263 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 AREL1O15033 823 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 AP1G1O43747 822 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 CPP00450 1065 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 PDHA1P08559 390 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 TIMP2P16035 220 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 SUOXP51687 545 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 UGP2Q16851 508 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 CCDC137Q6PK04 289 aaKnown RBP16.17■□□□□ 0.18
LRRC28-202ENST00000331450 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.17■□□□□ 0.18
LRRC28-202ENST00000331450 ARHGEF18Q6ZSZ5 1173 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 ZNF572Q7Z3I7 529 aaPredicted RBP16.17■□□□□ 0.18
LRRC28-202ENST00000331450 GANCQ8TET4 914 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 PIH1D2Q8WWB5 315 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 RAB7BQ96AH8 199 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 TOE1Q96GM8 510 aaKnown RBP16.17■□□□□ 0.18
LRRC28-202ENST00000331450 MLPHQ9BV36 600 aaPredicted RBP16.17■□□□□ 0.18
LRRC28-202ENST00000331450 BTBD1Q9H0C5 482 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 DDX47Q9H0S4 455 aaKnown RBP16.17■□□□□ 0.18
LRRC28-202ENST00000331450 KDM4CQ9H3R0 1056 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 CDC23Q9UJX2 597 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 NEU2Q9Y3R4 380 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 PCDHB9Q9Y5E1 797 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 WDFY4Q6ZS81 3184 aa16.17■□□□□ 0.18
LRRC28-202ENST00000331450 DOCK9Q9BZ29 2069 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 F5H423 210 aaPredicted RBP16.16■□□□□ 0.18
LRRC28-202ENST00000331450 CCDC188H7C350 402 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 ZNF500O60304 480 aaPredicted RBP16.16■□□□□ 0.18
LRRC28-202ENST00000331450 METTL18O95568 372 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 IFNB1P01574 187 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 ETS1P14921 441 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 CA4P22748 312 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 PTPN5P54829 565 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 RPL26P61254 145 aaKnown RBP16.16■□□□□ 0.18
LRRC28-202ENST00000331450 LMNB2Q03252 620 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 CCDC15Q0P6D6 951 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 MPP3Q13368 585 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 PARP6Q2NL67 630 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 ARMC12Q5T9G4 340 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 FBXL19Q6PCT2 694 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 SLC36A4Q6YBV0 504 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 PRUNE1Q86TP1 453 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 C11orf74Q86VG3 221 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 ATL2Q8NHH9 583 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 ZNF592Q92610 1267 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 SLCO2A1Q92959 643 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 PPP1R2P1Q96PQ5 205 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 PCED1AQ9H1Q7 454 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 PCDH9Q9HC56 1237 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 UBP1Q9NZI7 540 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 PCYOX1Q9UHG3 505 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 FAM153AQ9UHL3 310 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 RPL26L1Q9UNX3 145 aaKnown RBP16.16■□□□□ 0.18
LRRC28-202ENST00000331450 CHKBQ9Y259 395 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 PPIL1Q9Y3C6 166 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 FADS3Q9Y5Q0 445 aa16.16■□□□□ 0.18
LRRC28-202ENST00000331450 ZNF106Q9H2Y7 1883 aaKnown RBP16.16■□□□□ 0.18
LRRC28-202ENST00000331450 TP53BP1Q12888 1972 aaPredicted RBP16.15■□□□□ 0.18
LRRC28-202ENST00000331450 PMPCBO75439 489 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 ANXA9O76027 345 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 URI1O94763 535 aaPredicted RBP16.15■□□□□ 0.18
LRRC28-202ENST00000331450 SEMA4FO95754 770 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 ZSCAN5DPP0CG00 497 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 RPL22P35268 128 aaKnown RBP16.15■□□□□ 0.18
LRRC28-202ENST00000331450 MMP12P39900 470 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 GEMP55040 296 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 LRRC73Q5JTD7 316 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 CFAP58Q5T655 872 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 PMS2CLQ68D20 193 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 KCTD11Q693B1 232 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 ZC3H14Q6PJT7 736 aaKnown RBP16.15■□□□□ 0.18
LRRC28-202ENST00000331450 CCDC89Q8N998 374 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 OR2T34Q8NGX1 318 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 OR14C36Q8NHC7 312 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 KIF18AQ8NI77 898 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 PDCD6IPQ8WUM4 868 aaKnown RBP16.15■□□□□ 0.18
LRRC28-202ENST00000331450 FEM1CQ96JP0 617 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 ZC3H10Q96K80 434 aaKnown RBP16.15■□□□□ 0.18
LRRC28-202ENST00000331450 MRGPRX2Q96LB1 330 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 MCCC1Q96RQ3 725 aaPredicted RBP16.15■□□□□ 0.18
LRRC28-202ENST00000331450 GPR174Q9BXC1 333 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 DUSP15Q9H1R2 295 aaPredicted RBP16.15■□□□□ 0.18
LRRC28-202ENST00000331450 PREBQ9HCU5 417 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 PCDH12Q9NPG4 1184 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 PAK5Q9P286 719 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 GGT7Q9UJ14 662 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 PHTF1Q9UMS5 762 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 ITM2BQ9Y287 266 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 ARIH1Q9Y4X5 557 aaPredicted RBP16.15■□□□□ 0.18
LRRC28-202ENST00000331450 MRFAP1Q9Y605 127 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 R4GN57 208 aa16.15■□□□□ 0.18
LRRC28-202ENST00000331450 LOC285095A0A1B0GVY8 99 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 ESPNB1AK53 854 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 RIOK3O14730 519 aaKnown RBP16.14■□□□□ 0.17
LRRC28-202ENST00000331450 EPOP01588 193 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 ITIH2P19823 946 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 ADRA1AP35348 466 aa16.14■□□□□ 0.17
LRRC28-202ENST00000331450 GRIA4P48058 902 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms