RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 FAM83EQ2M2I3 478 aa15.49■□□□□ 0.07
BRCC3-201ENST00000330045 TIGD5Q53EQ6 642 aa15.49■□□□□ 0.07
BRCC3-201ENST00000330045 ZNF280DQ6N043 979 aa15.49■□□□□ 0.07
BRCC3-201ENST00000330045 NEPROQ6NW34 567 aa15.49■□□□□ 0.07
BRCC3-201ENST00000330045 GALNT4Q8N4A0 578 aa15.49■□□□□ 0.07
BRCC3-201ENST00000330045 SPPL2BQ8TCT7 592 aa15.49■□□□□ 0.07
BRCC3-201ENST00000330045 LPPQ93052 612 aa15.49■□□□□ 0.07
BRCC3-201ENST00000330045 DGCR14Q96DF8 476 aaKnown RBP15.49■□□□□ 0.07
BRCC3-201ENST00000330045 RTP3Q9BQQ7 232 aa15.49■□□□□ 0.07
BRCC3-201ENST00000330045 IGSF5Q9NSI5 407 aa15.49■□□□□ 0.07
BRCC3-201ENST00000330045 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.49■□□□□ 0.07
BRCC3-201ENST00000330045 MYLKQ15746 1914 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 AURKAO14965 403 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 FGF10O15520 208 aaPredicted RBP15.48■□□□□ 0.07
BRCC3-201ENST00000330045 TNFAIP8O95379 198 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 TFAP2AP05549 437 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 CHRNA4P43681 627 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 FCGRTP55899 365 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 PSME3P61289 254 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 CACNB2Q08289 660 aaPredicted RBP15.48■□□□□ 0.07
BRCC3-201ENST00000330045 STX5Q13190 355 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 EIF4EBP2Q13542 120 aaPredicted RBP15.48■□□□□ 0.07
BRCC3-201ENST00000330045 TECRLQ5HYJ1 363 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 ISLR2Q6UXK2 745 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 RANBP10Q6VN20 620 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 CHSY3Q70JA7 882 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 RNF135Q8IUD6 432 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 AHI1Q8N157 1196 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 PCDH20Q8N6Y1 951 aaKnown RBP15.48■□□□□ 0.07
BRCC3-201ENST00000330045 TMEM102Q8N9M5 508 aaPredicted RBP15.48■□□□□ 0.07
BRCC3-201ENST00000330045 ASB9Q96DX5 294 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 FAR2Q96K12 515 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 MRGPRX2Q96LB1 330 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 PAAF1Q9BRP4 392 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 PRKD2Q9BZL6 878 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 MRGBPQ9NV56 204 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 NDFIP2Q9NV92 336 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 PCDHGA7Q9Y5G6 932 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 IRAK2O43187 625 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 PAGE1O75459 146 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 RNASEH2AO75792 299 aaKnown RBP15.48■□□□□ 0.07
BRCC3-201ENST00000330045 SLC5A9Q2M3M2 681 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 BRMS1LQ5PSV4 323 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 RBM20Q5T481 1227 aaKnown RBP15.48■□□□□ 0.07
BRCC3-201ENST00000330045 C6orf52Q5T4I8 152 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 AGAP9Q5VTM2 703 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 TIGD7Q6NT04 549 aaPredicted RBP15.48■□□□□ 0.07
BRCC3-201ENST00000330045 SCML4Q8N228 414 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 AFAP1L2Q8N4X5 818 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 CCDC126Q96EE4 140 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 NDNQ99608 321 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 TRIM62Q9BVG3 475 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 EML4Q9HC35 981 aaKnown RBP15.48■□□□□ 0.07
BRCC3-201ENST00000330045 CYP4F12Q9HCS2 524 aa15.48■□□□□ 0.07
BRCC3-201ENST00000330045 MRPL40Q9NQ50 206 aaKnown RBP15.48■□□□□ 0.07
BRCC3-201ENST00000330045 ARL5CA6NH57 179 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 IPO13O94829 963 aaKnown RBP15.47■□□□□ 0.07
BRCC3-201ENST00000330045 KCNA5P22460 613 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 HOXC13P31276 330 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 SCNN1GP51170 649 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 CLCN2P51788 898 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 HTRA3P83110 453 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 CDKL1Q00532 357 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 PFKPQ01813 784 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 PDAP1Q13442 181 aaKnown RBP15.47■□□□□ 0.07
BRCC3-201ENST00000330045 TRIM25Q14258 630 aaKnown RBP15.47■□□□□ 0.07
BRCC3-201ENST00000330045 MAPRE2Q15555 327 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 BTBD8Q5XKL5 378 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 FAM171BQ6P995 826 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 KIAA0408Q6ZU52 694 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 SCAMP5Q8TAC9 235 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 ATP6V1E2Q96A05 226 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 NMD3Q96D46 503 aaKnown RBP15.47■□□□□ 0.07
BRCC3-201ENST00000330045 FCRL2Q96LA5 508 aaPredicted RBP15.47■□□□□ 0.07
BRCC3-201ENST00000330045 MRPS26Q9BYN8 205 aaKnown RBP15.47■□□□□ 0.07
BRCC3-201ENST00000330045 ZNF696Q9H7X3 374 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 MEAF6Q9HAF1 191 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 TRPC7Q9HCX4 862 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 PLK2Q9NYY3 685 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 SUCOQ9UBS9 1254 aaKnown RBP15.47■□□□□ 0.07
BRCC3-201ENST00000330045 APPL1Q9UKG1 709 aa15.47■□□□□ 0.07
BRCC3-201ENST00000330045 MRPL42Q9Y6G3 142 aaKnown RBP15.47■□□□□ 0.07
BRCC3-201ENST00000330045 ANKRD33BA6NCL7 494 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 A8MT66 165 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 E7ENX8 843 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 UBDO15205 165 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 DUSP11O75319 330 aaKnown RBP15.46■□□□□ 0.07
BRCC3-201ENST00000330045 CTSHP09668 335 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 HTR7P34969 479 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 PSMD8P48556 350 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 MYBPC1Q00872 1141 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 GK3PQ14409 553 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 SQLEQ14534 574 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 ZNF789Q5FWF6 425 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 MANEALQ5VSG8 457 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 IL23RQ5VWK5 629 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 GDF6Q6KF10 455 aaPredicted RBP15.46■□□□□ 0.07
BRCC3-201ENST00000330045 BEND5Q7L4P6 421 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 HMGCLL1Q8TB92 370 aa15.46■□□□□ 0.07
BRCC3-201ENST00000330045 OLFM1Q99784 485 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms