RNA–Protein interactions for RNA: ENST00000328796.4

CLDN6-201, Transcript of claudin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN6, Length 1,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6-201ENST00000328796 ZSWIM9Q86XI8 627 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 ZCCHC9Q8N567 271 aaKnown RBP17■□□□□ 0.31
CLDN6-201ENST00000328796 ARRDC2Q8TBH0 407 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 TFB1MQ8WVM0 346 aaKnown RBP17■□□□□ 0.31
CLDN6-201ENST00000328796 QKIQ96PU8 341 aaKnown RBP eCLIP17■□□□□ 0.31
CLDN6-201ENST00000328796 SEMA3CQ99985 751 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 CAPN10Q9HC96 672 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 SLCO1B1Q9Y6L6 691 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 LRRK1Q38SD2 2015 aa17■□□□□ 0.31
CLDN6-201ENST00000328796 CABIN1Q9Y6J0 2220 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 ADAMTS9Q9P2N4 1935 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 A0A1W2PQU0 124 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 UPK3BL1B0FP48 263 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 UPK3BL2E5RIL1 263 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 KHNYNO15037 678 aaKnown RBP16.99■□□□□ 0.31
CLDN6-201ENST00000328796 BCAT2O15382 392 aaPredicted RBP16.99■□□□□ 0.31
CLDN6-201ENST00000328796 ZSCAN12O43309 604 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 NEBLO76041 1014 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 PCDH8O95206 1070 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 SERPINF2P08697 491 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 GNSP15586 552 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 OTUD4Q01804 1114 aaKnown RBP16.99■□□□□ 0.31
CLDN6-201ENST00000328796 DSC2Q02487 901 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 ITKQ08881 620 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 TRAF2Q12933 501 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 KLF1Q13351 362 aaPredicted RBP16.99■□□□□ 0.31
CLDN6-201ENST00000328796 IHHQ14623 411 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 RPS6KA1Q15418 735 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 UGP2Q16851 508 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 TRIM61Q5EBN2 209 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 CCDC181Q5TID7 509 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 TCEAL6Q6IPX3 200 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 KIAA1161Q6NSJ0 714 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 B4GALNT4Q76KP1 1039 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 PRPF39Q86UA1 669 aaKnown RBP16.99■□□□□ 0.31
CLDN6-201ENST00000328796 ZC3H18Q86VM9 953 aaKnown RBP16.99■□□□□ 0.31
CLDN6-201ENST00000328796 ZSCAN30Q86W11 494 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 ACTL9Q8TC94 416 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 TCEAL3Q969E4 200 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 FEM1CQ96JP0 617 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 MIR1-1HGQ9H1L0 117 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 GGT7Q9UJ14 662 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 SLC6A14Q9UN76 642 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 ZFR2Q9UPR6 939 aaKnown RBP16.99■□□□□ 0.31
CLDN6-201ENST00000328796 DMTF1Q9Y222 760 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 ITM2BQ9Y287 266 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 PCDHGC4Q9Y5F7 938 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 CFAP54Q96N23 3096 aa16.99■□□□□ 0.31
CLDN6-201ENST00000328796 A0A1W2PQ67 120 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 PRR5-ARHGAP8B1AHC4 643 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 MTSS1O43312 755 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 ITIH2P19823 946 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 PTPN3P26045 913 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 MAT2AP31153 395 aaKnown RBP16.98■□□□□ 0.31
CLDN6-201ENST00000328796 IRX4P78413 519 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 NIPAL4Q0D2K0 466 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 ELP6Q0PNE2 266 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 WASHC5Q12768 1159 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 ZNF284Q2VY69 593 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 TEX44Q53QW1 395 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 SLC45A4Q5BKX6 768 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 LRRC73Q5JTD7 316 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 CFAP58Q5T655 872 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 KIAA2013Q8IYS2 634 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 TLR10Q9BXR5 811 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 CARD9Q9H257 536 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 TM9SF3Q9HD45 589 aa16.98■□□□□ 0.31
CLDN6-201ENST00000328796 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.98■□□□□ 0.31
CLDN6-201ENST00000328796 GOLGA6L9A6NEM1 432 aa16.97■□□□□ 0.31
CLDN6-201ENST00000328796 FZD6O60353 706 aa16.97■□□□□ 0.31
CLDN6-201ENST00000328796 CFIP05156 583 aa16.97■□□□□ 0.31
CLDN6-201ENST00000328796 XPAP23025 273 aaPredicted RBP16.97■□□□□ 0.31
CLDN6-201ENST00000328796 POLR2LP62875 67 aaKnown RBP16.97■□□□□ 0.31
CLDN6-201ENST00000328796 RPS21P63220 83 aaKnown RBP16.97■□□□□ 0.31
CLDN6-201ENST00000328796 RACK1P63244 317 aaKnown RBP16.97■□□□□ 0.31
CLDN6-201ENST00000328796 TMEM52BQ4KMG9 183 aa16.97■□□□□ 0.31
CLDN6-201ENST00000328796 SETMARQ53H47 684 aaPredicted RBP16.97■□□□□ 0.31
CLDN6-201ENST00000328796 SEL1L2Q5TEA6 688 aa16.97■□□□□ 0.31
CLDN6-201ENST00000328796 SEL1L3Q68CR1 1132 aa16.97■□□□□ 0.31
CLDN6-201ENST00000328796 NAPEPLDQ6IQ20 393 aa16.97■□□□□ 0.31
CLDN6-201ENST00000328796 C12orf50Q8NA57 414 aaPredicted RBP16.97■□□□□ 0.31
CLDN6-201ENST00000328796 TEKT5Q96M29 485 aa16.97■□□□□ 0.31
CLDN6-201ENST00000328796 NUSAP1Q9BXS6 441 aaKnown RBP16.97■□□□□ 0.31
CLDN6-201ENST00000328796 CEP41Q9BYV8 373 aa16.97■□□□□ 0.31
CLDN6-201ENST00000328796 PCDH12Q9NPG4 1184 aa16.97■□□□□ 0.31
CLDN6-201ENST00000328796 SEPT10Q9P0V9 454 aa16.97■□□□□ 0.31
CLDN6-201ENST00000328796 TTLL3Q9Y4R7 772 aa16.97■□□□□ 0.31
CLDN6-201ENST00000328796 RAI2Q9Y5P3 530 aa16.97■□□□□ 0.31
CLDN6-201ENST00000328796 TP53BP1Q12888 1972 aaPredicted RBP16.96■□□□□ 0.31
CLDN6-201ENST00000328796 DMXL1Q9Y485 3027 aa16.96■□□□□ 0.31
CLDN6-201ENST00000328796 ASCC3Q8N3C0 2202 aaKnown RBP16.96■□□□□ 0.31
CLDN6-201ENST00000328796 LNP1A1A4G5 178 aa16.96■□□□□ 0.31
CLDN6-201ENST00000328796 H7C0C1 242 aa16.96■□□□□ 0.31
CLDN6-201ENST00000328796 NEMP1O14524 444 aa16.96■□□□□ 0.31
CLDN6-201ENST00000328796 RIOK3O14730 519 aaKnown RBP16.96■□□□□ 0.31
CLDN6-201ENST00000328796 PGLSO95336 258 aa16.96■□□□□ 0.31
CLDN6-201ENST00000328796 MMP2P08253 660 aa16.96■□□□□ 0.31
CLDN6-201ENST00000328796 MMP12P39900 470 aa16.96■□□□□ 0.31
CLDN6-201ENST00000328796 ATP5OP48047 213 aa16.96■□□□□ 0.31
CLDN6-201ENST00000328796 GRIA4P48058 902 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms