RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 CWC15Q9P013 229 aaKnown RBP8.21□□□□□ -1.1
CCNC-201ENST00000326298 HPCAL4Q9UM19 191 aa8.21□□□□□ -1.1
CCNC-201ENST00000326298 OR1A2Q9Y585 309 aa8.21□□□□□ -1.1
CCNC-201ENST00000326298 SPENQ96T58 3664 aaKnown RBP8.2□□□□□ -1.1
CCNC-201ENST00000326298 CPED1A4D0V7 1026 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 AQP9O43315 295 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 PRAMEF11O60813 436 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 C6P13671 934 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 TSHRP16473 764 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 EIF4A3P38919 411 aaKnown RBP8.2□□□□□ -1.1
CCNC-201ENST00000326298 RABIFP47224 123 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 PDX1P52945 283 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 ADKP55263 362 aaKnown RBP8.2□□□□□ -1.1
CCNC-201ENST00000326298 TPI1P60174 286 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 HNRNPKP61978 463 aaKnown RBP eCLIP8.2□□□□□ -1.1
CCNC-201ENST00000326298 IHHQ14623 411 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 UGP2Q16851 508 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 SMTNL2Q2TAL5 461 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 INO80DQ53TQ3 878 aaPredicted RBP8.2□□□□□ -1.1
CCNC-201ENST00000326298 PRRT3Q5FWE3 981 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 PPP6R3Q5H9R7 873 aaPredicted RBP8.2□□□□□ -1.1
CCNC-201ENST00000326298 AFMIDQ63HM1 303 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 HGSNATQ68CP4 663 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 IFI44Q8TCB0 444 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 LRRN4Q8WUT4 740 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 PTCD2Q8WV60 388 aaKnown RBP8.2□□□□□ -1.1
CCNC-201ENST00000326298 NXPE2Q96DL1 559 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 SCUBE2Q9NQ36 999 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 MYO1AQ9UBC5 1043 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 ANKRD36A6QL64 1941 aa8.2□□□□□ -1.1
CCNC-201ENST00000326298 A0A1B0GTH6 734 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 AGRPO00253 132 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 EEF2KO00418 725 aaKnown RBP8.19□□□□□ -1.1
CCNC-201ENST00000326298 YY2O15391 372 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 TM7SF2O76062 418 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 IGSF6O95976 241 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 PEX11BO96011 259 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 LIG3P49916 1009 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 YBEYP58557 167 aaPredicted RBP8.19□□□□□ -1.1
CCNC-201ENST00000326298 SLC10A7Q0GE19 358 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 CCDC15Q0P6D6 951 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 CCDC173Q0VFZ6 552 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 RALGDSQ12967 914 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 ILKQ13418 452 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 INPP5AQ14642 412 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 NR1I3Q14994 352 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 PARP15Q460N3 678 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 ERMARDQ5T6L9 678 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 PCSK4Q6UW60 755 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 RFX8Q6ZV50 586 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 PHACTR4Q8IZ21 702 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 PGBD5Q8N414 524 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 FAM181AQ8N9Y4 354 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 RAB7BQ96AH8 199 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 LGR4Q9BXB1 951 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 NRSN2Q9GZP1 204 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 SUV39H2Q9H5I1 410 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 MRPL40Q9NQ50 206 aaKnown RBP8.19□□□□□ -1.1
CCNC-201ENST00000326298 AIPL1Q9NZN9 384 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 UBA2Q9UBT2 640 aaPredicted RBP8.19□□□□□ -1.1
CCNC-201ENST00000326298 CNOT8Q9UFF9 292 aaKnown RBP8.19□□□□□ -1.1
CCNC-201ENST00000326298 APOBEC3BQ9UH17 382 aaKnown RBP8.19□□□□□ -1.1
CCNC-201ENST00000326298 IPO11Q9UI26 975 aaKnown RBP8.19□□□□□ -1.1
CCNC-201ENST00000326298 LRP4O75096 1905 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 SHROOM3Q8TF72 1996 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 CXorf51AA0A1B0GTR3 108 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 TSPAN11A1L157 253 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 TMEM202A6NGA9 273 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 DFFAO00273 331 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 RIOK3O14730 519 aaKnown RBP8.19□□□□□ -1.1
CCNC-201ENST00000326298 USP12O75317 370 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 CSO75390 466 aaKnown RBP8.19□□□□□ -1.1
CCNC-201ENST00000326298 FUCA1P04066 466 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 AMPD1P23109 780 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 MMP12P39900 470 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 ZNF165P49910 485 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 GEMIN4P57678 1058 aaKnown RBP8.19□□□□□ -1.1
CCNC-201ENST00000326298 DPYSQ14117 519 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 ALG11Q2TAA5 492 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 TMEM52BQ4KMG9 183 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 EFL1Q7Z2Z2 1120 aaKnown RBP8.19□□□□□ -1.1
CCNC-201ENST00000326298 RD3Q7Z3Z2 195 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 LUZP1Q86V48 1076 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 ANKRD20A12PQ8NF67 263 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 IFT43Q96FT9 208 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 PDXPQ96GD0 296 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 ATXN7L3BQ96GX2 97 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.19□□□□□ -1.1
CCNC-201ENST00000326298 OSBPL1AQ9BXW6 950 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 CPEB1Q9BZB8 566 aaKnown RBP8.19□□□□□ -1.1
CCNC-201ENST00000326298 RETREG1Q9H6L5 497 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 PARVAQ9NVD7 372 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 DKK3Q9UBP4 350 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 DAAM1Q9Y4D1 1078 aa8.19□□□□□ -1.1
CCNC-201ENST00000326298 ZSCAN5CA6NGD5 496 aaPredicted RBP8.18□□□□□ -1.1
CCNC-201ENST00000326298 TRAFD1O14545 582 aaPredicted RBP8.18□□□□□ -1.1
CCNC-201ENST00000326298 CD48P09326 243 aa8.18□□□□□ -1.1
CCNC-201ENST00000326298 PBX1P40424 430 aa8.18□□□□□ -1.1
CCNC-201ENST00000326298 PRKCIP41743 596 aa8.18□□□□□ -1.1
CCNC-201ENST00000326298 THOP1P52888 689 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms