RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ANGPT2O15123 496 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 HSPA8P11142 646 aaKnown RBP12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 ALOX15P16050 662 aaPredicted RBP12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 AXLP30530 894 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 HADHAP40939 763 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 CCL14Q16627 93 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 UBXN11Q5T124 520 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 CXCL17Q6UXB2 119 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 HERC6Q8IVU3 1022 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 MIPOL1Q8TD10 442 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 CYGBQ8WWM9 190 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 SLC9A7Q96T83 725 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 CCDC68Q9H2F9 335 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 CROTQ9UKG9 612 aa12.99□□□□□ -0.33
HMGCS1-201ENST00000325110 LTBP3Q9NS15 1303 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 SDHDO14521 159 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 GIPC1O14908 333 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 PSMD3O43242 534 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 SIX3O95343 332 aaPredicted RBP12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 CDH15P55291 814 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 EFEMP1Q12805 493 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 MAPRE2Q15555 327 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 PFKFB4Q16877 469 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 PIGGQ5H8A4 983 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 DCLRE1AQ6PJP8 1040 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 RDH11Q8TC12 318 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 PBXIP1Q96AQ6 731 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 B3GALT6Q96L58 329 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 DCUN1D5Q9BTE7 237 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 SPON2Q9BUD6 331 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 MID1IP1Q9NPA3 183 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 RGS18Q9NS28 235 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 FAF1Q9UNN5 650 aaPredicted RBP12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 FAM50BQ9Y247 325 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 MTF2Q9Y483 593 aaPredicted RBP12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 KCTD3Q9Y597 815 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 ODC1P11926 461 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 KCNE1P15382 129 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 UGT1A6P19224 532 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 DSC2Q02487 901 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 YWHAHQ04917 246 aaPredicted RBP12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 OGFRL1Q5TC84 451 aaPredicted RBP12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 OVOS1Q6IE37 1185 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 UGT2A3Q6UWM9 527 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 CLEC14AQ86T13 490 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 CIR1Q86X95 450 aaPredicted RBP12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 LSMEM2Q8N112 164 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 KDM1BQ8NB78 822 aa12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 UTP6Q9NYH9 597 aaKnown RBP12.98□□□□□ -0.33
HMGCS1-201ENST00000325110 SMIM31A0A1B0GVY4 71 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 A8MT66 165 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 AP3B1O00203 1094 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 BAIAP3O94812 1187 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 IPO13O94829 963 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 SNRPB2P08579 225 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 LTA4HP09960 611 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 RPL10P27635 214 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 MAPK10P53779 464 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 C1QTNF8P60827 252 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 XIAPP98170 497 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 REP15Q6BDI9 236 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 RAB44Q7Z6P3 723 aaPredicted RBP12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 SNRNP27Q8WVK2 155 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 KCTD13Q8WZ19 329 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 DGCR14Q96DF8 476 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 OLFM1Q99784 485 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 OCEL1Q9H607 264 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 ENTPD7Q9NQZ7 604 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 TRAF6Q9Y4K3 522 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 PTPRFP10586 1907 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 ARHGAP10A1A4S6 786 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 SUPT3HB4E1H0 165 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 SUPT3HO75486 399 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 SULT2A1Q06520 285 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 TBCELQ5QJ74 424 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 MARC1Q5VT66 337 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 KCTD11Q693B1 232 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 ALKAL1Q6UXT8 129 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 MFSD6LQ8IWD5 586 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 KIFC1Q9BW19 673 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 LCTP09848 1927 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 TCAF2A6NFQ2 919 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 LRRC14BA6NHZ5 514 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 F8W810 466 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 SBK3P0C264 359 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 RGS2P41220 211 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 CRYBB1P53674 252 aaPredicted RBP12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 HNRNPDQ14103 355 aaKnown RBP12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 VPS26BQ4G0F5 336 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 KLHDC10Q6PID8 442 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 DHFR2Q86XF0 187 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 THEM5Q8N1Q8 247 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 PTGR2Q8N8N7 351 aaPredicted RBP12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 TRPC4APQ8TEL6 797 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 ZFAND2BQ8WV99 257 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 BRI3BPQ8WY22 251 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 CASP10Q92851 521 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 NACA2Q9H009 215 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 SPAG4Q9NPE6 437 aa12.97□□□□□ -0.33
HMGCS1-201ENST00000325110 CDH9Q9ULB4 789 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms