RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 PLA2G4CQ9UP65 541 aa18.21■□□□□ 0.51
SYNE4-201ENST00000324444 MTF2Q9Y483 593 aaPredicted RBP18.21■□□□□ 0.51
SYNE4-201ENST00000324444 F5P12259 2224 aa18.21■□□□□ 0.51
SYNE4-201ENST00000324444 LOC285095A0A1B0GVY8 99 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 FAM170BA6NMN3 283 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 GFRA3O60609 400 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 TCEA3O75764 348 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 CD160O95971 181 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 MMP2P08253 660 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 RECQLP46063 649 aaPredicted RBP18.2■□□□□ 0.5
SYNE4-201ENST00000324444 RPL26P61254 145 aaKnown RBP18.2■□□□□ 0.5
SYNE4-201ENST00000324444 SPARCL1Q14515 664 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 MSS51Q4VC12 460 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 PCID2Q5JVF3 399 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 ZNF449Q6P9G9 518 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 NLRP9Q7RTR0 991 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 ANKMY2Q8IV38 441 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 PPHLN1Q8NEY8 458 aaKnown RBP18.2■□□□□ 0.5
SYNE4-201ENST00000324444 GABPB2Q8TAK5 448 aaPredicted RBP18.2■□□□□ 0.5
SYNE4-201ENST00000324444 ZIM3Q96PE6 472 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 TUBGCP5Q96RT8 1024 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 STMN4Q9H169 189 aaPredicted RBP18.2■□□□□ 0.5
SYNE4-201ENST00000324444 LRRC4CQ9HCJ2 640 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 LTB4R2Q9NPC1 389 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 LHX3Q9UBR4 397 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 RPL26L1Q9UNX3 145 aaKnown RBP18.2■□□□□ 0.5
SYNE4-201ENST00000324444 CHMP2BQ9UQN3 213 aa18.2■□□□□ 0.5
SYNE4-201ENST00000324444 RIF1Q5UIP0 2472 aaKnown RBP18.2■□□□□ 0.5
SYNE4-201ENST00000324444 PROB1E7EW31 1015 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 SOCS5O75159 536 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 AVILO75366 819 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 SASH3O75995 380 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 NDST3O95803 873 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 DLDP09622 509 aaKnown RBP18.19■□□□□ 0.5
SYNE4-201ENST00000324444 MYZAPP0CAP1 466 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 SRCP12931 536 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 PCSK7Q16549 785 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 SPANXN3Q5MJ09 141 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 NCEH1Q6PIU2 408 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 NDUFAF2Q8N183 169 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 RIBC1Q8N443 379 aaPredicted RBP18.19■□□□□ 0.5
SYNE4-201ENST00000324444 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.19■□□□□ 0.5
SYNE4-201ENST00000324444 OR2AP1Q8NGE2 309 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 CHFRQ96EP1 664 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 RANBP9Q96S59 729 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 ATP13A3Q9H7F0 1226 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 NOD2Q9HC29 1040 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 MRM3Q9HC36 420 aaKnown RBP18.19■□□□□ 0.5
SYNE4-201ENST00000324444 ERVW-1Q9UQF0 538 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 MRPS17Q9Y2R5 130 aaKnown RBP18.19■□□□□ 0.5
SYNE4-201ENST00000324444 FCF1Q9Y324 198 aaKnown RBP18.19■□□□□ 0.5
SYNE4-201ENST00000324444 DMDP11532 3685 aa18.19■□□□□ 0.5
SYNE4-201ENST00000324444 PTPRZ1P23471 2315 aaPredicted RBP18.18■□□□□ 0.5
SYNE4-201ENST00000324444 FAM237BA0A1B0GVD1 139 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 HEATR9A2RTY3 570 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 MUSKO15146 869 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 ATP9BO43861 1147 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 AGTP01019 485 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 ADRA1DP25100 572 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 MGAT1P26572 445 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 TARSP26639 723 aaKnown RBP18.18■□□□□ 0.5
SYNE4-201ENST00000324444 GRIA1P42261 906 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 BCL2L1Q07817 233 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 FRG1Q14331 258 aaKnown RBP18.18■□□□□ 0.5
SYNE4-201ENST00000324444 SLC1A5Q15758 541 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 ACCSLQ4AC99 568 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 C22orf39Q6P5X5 142 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 ZNF852Q6ZMS4 543 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 C12orf40Q86WS4 652 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 C1orf210Q8IVY1 113 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 GSDMBQ8TAX9 411 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 CDKL2Q92772 493 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 MSANTD3Q96H12 275 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 CYTH2Q99418 400 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 CPEB1Q9BZB8 566 aaKnown RBP18.18■□□□□ 0.5
SYNE4-201ENST00000324444 OSBPL6Q9BZF3 934 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 CIPCQ9C0C6 399 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 EPB41L4BQ9H329 900 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 ELOVL2Q9NXB9 296 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.18■□□□□ 0.5
SYNE4-201ENST00000324444 CACNA1IQ9P0X4 2223 aa18.18■□□□□ 0.5
SYNE4-201ENST00000324444 MAN2B1O00754 1011 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 NPC1O15118 1278 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 USP12O75317 370 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 USP1O94782 785 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 POP4O95707 220 aaKnown RBP18.17■□□□□ 0.5
SYNE4-201ENST00000324444 MT-CO1P00395 513 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 PAMP19021 973 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 NFKBIAP25963 317 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 SERPINA4P29622 427 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 ATP5DP30049 168 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 GJA4P35212 333 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 GRIA2P42262 883 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 MAGEA9P43362 315 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 FAM193AP78312 1265 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 FASTKD3Q14CZ7 662 aaKnown RBP18.17■□□□□ 0.5
SYNE4-201ENST00000324444 CARD16Q5EG05 197 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 TERB1Q8NA31 727 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 PEX13Q92968 403 aa18.17■□□□□ 0.5
SYNE4-201ENST00000324444 LRIG1Q96JA1 1093 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms