RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 HGSNATQ68CP4 663 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 KRT80Q6KB66 452 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 CREG2Q8IUH2 290 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 NAT16Q8N8M0 369 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 TFAP2BQ92481 460 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 ELMO3Q96BJ8 720 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 FAM83DQ9H4H8 585 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 SIX2Q9NPC8 291 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 PDLIM7Q9NR12 457 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 STOML1Q9UBI4 398 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 C15orf38-AP3S2A0A0A6YYH1 394 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 ITGAXP20702 1163 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 OGNP20774 298 aaKnown RBP12.87□□□□□ -0.35
CCDC149-201ENST00000324309 ATAD3BQ5T9A4 648 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 ARPINQ7Z6K5 226 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 RIN3Q8TB24 985 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 ZNF516Q92618 1163 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 ART4Q93070 314 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 MED8Q96G25 268 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 MSANTD3Q96H12 275 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 NKX2-4Q9H2Z4 354 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 GGA2Q9UJY4 613 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 FAM237BA0A1B0GVD1 139 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 ADAMTS4O75173 837 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 PRIM2P49643 509 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 NEK3P51956 506 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 PTPN5P54829 565 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 OR9Q1Q8NGQ5 310 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 SLC35F5Q8WV83 523 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 ZBTB10Q96DT7 871 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 PGM2Q96G03 612 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 SLC2A4RGQ9NR83 387 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 DNAAF2Q9NVR5 837 aaKnown RBP12.87□□□□□ -0.35
CCDC149-201ENST00000324309 UBR3Q6ZT12 1888 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 TAF1AQ15573 450 aaPredicted RBP12.87□□□□□ -0.35
CCDC149-201ENST00000324309 SMAD1Q15797 465 aaKnown RBP12.87□□□□□ -0.35
CCDC149-201ENST00000324309 C17orf80Q9BSJ5 609 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 IL36AQ9UHA7 158 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 MRPS33Q9Y291 106 aaKnown RBP12.87□□□□□ -0.35
CCDC149-201ENST00000324309 GNG14A0A1W2PPG7 69 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 M0QZQ0 153 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 OXTRP30559 389 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 MC4RP32245 332 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 CHI3L1P36222 383 aaPredicted RBP12.87□□□□□ -0.35
CCDC149-201ENST00000324309 DSG1Q02413 1049 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 FBXO43Q4G163 708 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 SGO1Q5FBB7 561 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 CYP20A1Q6UW02 462 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 B3GNT9Q6UX72 402 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 RABEPKQ7Z6M1 372 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 DCAF4L2Q8NA75 395 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 RAB7BQ96AH8 199 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 MRPL57Q9BQC6 102 aaKnown RBP12.87□□□□□ -0.35
CCDC149-201ENST00000324309 TTYH3Q9C0H2 523 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 KLHL28Q9NXS3 571 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 ENTPD4Q9Y227 616 aa12.87□□□□□ -0.35
CCDC149-201ENST00000324309 MYADML2A6NDP7 307 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 SLC28A1O00337 649 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 PRMT5O14744 637 aaPredicted RBP12.86□□□□□ -0.35
CCDC149-201ENST00000324309 PRMT3O60678 531 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 CDKN2BP42772 138 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 GPR33Q49SQ1 333 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 TMC3Q7Z5M5 1100 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 CCDC33Q8N5R6 958 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 PLD5Q8N7P1 536 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 SRFBP1Q8NEF9 429 aaKnown RBP12.86□□□□□ -0.35
CCDC149-201ENST00000324309 NDRG2Q9UN36 371 aaKnown RBP12.86□□□□□ -0.35
CCDC149-201ENST00000324309 RREB1Q92766 1687 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 USP1O94782 785 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 UQCRBP14927 111 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 NTSP30990 170 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 DAB2P98082 770 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 COL9A3Q14050 684 aaPredicted RBP12.86□□□□□ -0.35
CCDC149-201ENST00000324309 TCEAL1Q15170 157 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 BHLHB9Q6PI77 547 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 NPNTQ6UXI9 565 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 OR14C36Q8NHC7 312 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 INPP5DQ92835 1189 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 RXFP1Q9HBX9 757 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 THAP1Q9NVV9 213 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 SOHLH2Q9NX45 425 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 GPN3Q9UHW5 284 aaPredicted RBP12.86□□□□□ -0.35
CCDC149-201ENST00000324309 ATP5F1P24539 256 aaPredicted RBP12.86□□□□□ -0.35
CCDC149-201ENST00000324309 MBLAC2Q68D91 279 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 KLHL5Q96PQ7 755 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 TRMOQ9BU70 441 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 MRPL46Q9H2W6 279 aaKnown RBP12.86□□□□□ -0.35
CCDC149-201ENST00000324309 LILRB3O75022 631 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 GRIA4P48058 902 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 ALDH18A1P54886 795 aaKnown RBP12.86□□□□□ -0.35
CCDC149-201ENST00000324309 TRIM32Q13049 653 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 COLGALT2Q8IYK4 626 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 FUKQ8N0W3 1084 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 FAM162AQ96A26 154 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 CEP41Q9BYV8 373 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 NEUROG2Q9H2A3 272 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 PTPRHQ9HD43 1115 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 SUSD2Q9UGT4 822 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 CD207Q9UJ71 328 aa12.86□□□□□ -0.35
CCDC149-201ENST00000324309 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms