RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 CDO1Q16878 200 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 LONRF2Q1L5Z9 754 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 TEX44Q53QW1 395 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 DNAJC21Q5F1R6 531 aaKnown RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 COX20Q5RI15 118 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 DCAF12L1Q5VU92 463 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 LYPLAL1Q5VWZ2 237 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 MBLAC2Q68D91 279 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 ZNF776Q68DI1 518 aaPredicted RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 KIAA1161Q6NSJ0 714 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 C22orf39Q6P5X5 142 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 C14orf80Q86SX3 495 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 CTAGE6Q86UF2 777 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 RASSF3Q86WH2 238 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 CREG2Q8IUH2 290 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 CTAGE4Q8IX94 777 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 MPP5Q8N3R9 675 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 SDR16C5Q8N3Y7 309 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 C12orf76Q8N812 135 aaPredicted RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 OR2T3Q8NH03 318 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 USP33Q8TEY7 942 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 FAM3CQ92520 227 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 ALG3Q92685 438 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 FGF14Q92915 247 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 IGSF8Q969P0 613 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 ELMO3Q96BJ8 720 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 ECHDC3Q96DC8 303 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 RSPRY1Q96DX4 576 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 TEKT5Q96M29 485 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 ZSWIM3Q96MP5 696 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 CINPQ9BW66 212 aaPredicted RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 C1QTNF7Q9BXJ2 289 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 CALN1Q9BXU9 219 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 FUT8Q9BYC5 575 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 RSPH9Q9H1X1 276 aaPredicted RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 ATP13A3Q9H7F0 1226 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 ATP13A1Q9HD20 1204 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 DNAJC17Q9NVM6 304 aaKnown RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 NSMCE4AQ9NXX6 385 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 IPO11Q9UI26 975 aaKnown RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 VANGL2Q9ULK5 521 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 CORO1CQ9ULV4 474 aaPredicted RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 PHTF1Q9UMS5 762 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 DMTF1Q9Y222 760 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 PIAS3Q9Y6X2 628 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 TMEM110-MUSTN1A8MSY1 372 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 QSOX1O00391 747 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 YKT6O15498 198 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 MFSD11O43934 449 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 MAGEC1O60732 1142 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 GRAP2O75791 330 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 SERPINA4P29622 427 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 KIR2DL1P43626 348 aaPredicted RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 MMP13P45452 471 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 POLD2P49005 469 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 NPY2RP49146 381 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 EIF3EP60228 445 aaKnown RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 ZNF235Q14590 738 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 CRY1Q16526 586 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 TTC31Q49AM3 519 aaPredicted RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 TMEM52BQ4KMG9 183 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 CARD16Q5EG05 197 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 MARC1Q5VT66 337 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 ADIPOR2Q86V24 386 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 CBARPQ8N350 705 aaPredicted RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 PJA1Q8NG27 643 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 OR2AP1Q8NGE2 309 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 RAPGEF5Q92565 580 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 IMP4Q96G21 291 aaKnown RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 MRGPRX3Q96LB0 322 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 TTC25Q96NG3 672 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 SLC22A12Q96S37 553 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 ADGRE3Q9BY15 652 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 NOL6Q9H6R4 1146 aaKnown RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 PLA2G4CQ9UP65 541 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 NEU2Q9Y3R4 380 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 COL5A1P20908 1838 aaPredicted RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 PRR33A8MZF0 331 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 NEDD8-MDP1E9PL57 170 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 TSPAN6O43657 245 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 TTC4O95801 387 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 FTCDO95954 541 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 PEX11BO96011 259 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 CALCAP01258 141 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 ATP1A1P05023 1023 aaKnown RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 SERPINF2P08697 491 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 IL9P15248 144 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 AOC1P19801 751 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 CSKP41240 450 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 SSR1P43307 286 aaKnown RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 MAPK9P45984 424 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 PGFP49763 221 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 OVGP1Q12889 678 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 C11orf91Q3C1V1 193 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 FUT11Q495W5 492 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 PEAR1Q5VY43 1037 aaPredicted RBP3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 NCEH1Q6PIU2 408 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 SRLQ86TD4 932 aa3.33□□□□□ -1.88
SCAMP1-201ENST00000320280 IQCHQ86VS3 1027 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms