RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 SUOXP51687 545 aa14.39□□□□□ -0.11
RPP40-201ENST00000319533 C1orf61Q13536 156 aa14.39□□□□□ -0.11
RPP40-201ENST00000319533 CDO1Q16878 200 aa14.39□□□□□ -0.11
RPP40-201ENST00000319533 TMEM52BQ4KMG9 183 aa14.39□□□□□ -0.11
RPP40-201ENST00000319533 ANO6Q4KMQ2 910 aa14.39□□□□□ -0.11
RPP40-201ENST00000319533 ATXN7L2Q5T6C5 722 aaPredicted RBP14.39□□□□□ -0.11
RPP40-201ENST00000319533 INO80CQ6PI98 192 aaPredicted RBP14.39□□□□□ -0.11
RPP40-201ENST00000319533 LVRNQ6Q4G3 990 aa14.39□□□□□ -0.11
RPP40-201ENST00000319533 VPS36Q86VN1 386 aa14.39□□□□□ -0.11
RPP40-201ENST00000319533 SDR16C5Q8N3Y7 309 aa14.39□□□□□ -0.11
RPP40-201ENST00000319533 FSTL5Q8N475 847 aaPredicted RBP14.39□□□□□ -0.11
RPP40-201ENST00000319533 AOPEPQ8N6M6 819 aa14.39□□□□□ -0.11
RPP40-201ENST00000319533 CCDC185Q8N715 623 aa14.39□□□□□ -0.11
RPP40-201ENST00000319533 WDR36Q8NI36 951 aaKnown RBP14.39□□□□□ -0.11
RPP40-201ENST00000319533 HCAR2Q8TDS4 363 aa14.39□□□□□ -0.11
RPP40-201ENST00000319533 PCMTD1Q96MG8 357 aaPredicted RBP14.39□□□□□ -0.11
RPP40-201ENST00000319533 GDAP1L1Q96MZ0 367 aa14.39□□□□□ -0.11
RPP40-201ENST00000319533 CPEB1Q9BZB8 566 aaKnown RBP14.39□□□□□ -0.11
RPP40-201ENST00000319533 SLC13A1Q9BZW2 595 aa14.39□□□□□ -0.11
RPP40-201ENST00000319533 LIMA1Q9UHB6 759 aaKnown RBP14.39□□□□□ -0.11
RPP40-201ENST00000319533 DAAM1Q9Y4D1 1078 aa14.39□□□□□ -0.11
RPP40-201ENST00000319533 KIF26BQ2KJY2 2108 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 CCDC187A0A096LP49 1063 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 PMS2P1A4D2B8 440 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 SMTNL1A8MU46 457 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 WASH4PA8MWX3 477 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 CASC3O15234 703 aaKnown RBP14.38□□□□□ -0.11
RPP40-201ENST00000319533 BUB1O43683 1085 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 UNGP13051 313 aaPredicted RBP14.38□□□□□ -0.11
RPP40-201ENST00000319533 TSHRP16473 764 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 BLKP51451 505 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 COPB1P53618 953 aaKnown RBP14.38□□□□□ -0.11
RPP40-201ENST00000319533 JAM2P57087 298 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 YBEYP58557 167 aaPredicted RBP14.38□□□□□ -0.11
RPP40-201ENST00000319533 PPARDQ03181 441 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 RAD51Q06609 339 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 PDAP1Q13442 181 aaKnown RBP14.38□□□□□ -0.11
RPP40-201ENST00000319533 AGERQ15109 404 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 FAXCQ5TGI0 409 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 ESRP1Q6NXG1 681 aaKnown RBP14.38□□□□□ -0.11
RPP40-201ENST00000319533 CRTC1Q6UUV9 634 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 TRIM72Q6ZMU5 477 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 LEKR1Q6ZMV7 388 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 ARL14Q8N4G2 192 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 RTL3Q8N8U3 475 aaKnown RBP14.38□□□□□ -0.11
RPP40-201ENST00000319533 CXorf40AQ8TE69 158 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 FAM172AQ8WUF8 416 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 LIN37Q96GY3 246 aaPredicted RBP14.38□□□□□ -0.11
RPP40-201ENST00000319533 EPAS1Q99814 870 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 CCDC3Q9BQI4 270 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 BPIFA3Q9BQP9 254 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 SEMA4CQ9C0C4 833 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 FAM207AQ9NSI2 230 aaPredicted RBP14.38□□□□□ -0.11
RPP40-201ENST00000319533 PADI4Q9UM07 663 aa14.38□□□□□ -0.11
RPP40-201ENST00000319533 TSPAN11A1L157 253 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 TMEM110-MUSTN1A8MSY1 372 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 LGALS16A8MUM7 142 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 J3QKU1 62 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 TNFSF15O95150 251 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 GJB6O95452 261 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 IGSF6O95976 241 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 ITGA2BP08514 1039 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 ITIH2P19823 946 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 RFC1P35251 1148 aaPredicted RBP14.37□□□□□ -0.11
RPP40-201ENST00000319533 HK3P52790 923 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 UBXN1Q04323 297 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 CLN3Q13286 438 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 NCAPHQ15003 741 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 IRF4Q15306 451 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 ELOCQ15369 112 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 WSCD2Q2TBF2 565 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 LRRC73Q5JTD7 316 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 ARL10Q8N8L6 244 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 SLC30A5Q8TAD4 765 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 C11orf70Q9BRQ4 267 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 EDEM3Q9BZQ6 932 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 KLC2Q9H0B6 622 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 PCDHGA7Q9Y5G6 932 aa14.37□□□□□ -0.11
RPP40-201ENST00000319533 TCRBV5S1A1TA0A578 114 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 B8ZZF3 427 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 GFPT2O94808 682 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 CELA2BP08218 269 aaPredicted RBP14.36□□□□□ -0.11
RPP40-201ENST00000319533 ALPIP09923 528 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 KRT3P12035 628 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 C6P13671 934 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 SOX5P35711 763 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 POLR2FP61218 127 aaKnown RBP14.36□□□□□ -0.11
RPP40-201ENST00000319533 RHOAP61586 193 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 ELP6Q0PNE2 266 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 EIF3IQ13347 325 aaKnown RBP14.36□□□□□ -0.11
RPP40-201ENST00000319533 SERINC3Q13530 473 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 SPIDRQ14159 915 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 LRRC14Q15048 493 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 SYCP1Q15431 976 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 CYTH1Q15438 398 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 ALG11Q2TAA5 492 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 PARP15Q460N3 678 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 WDR59Q6PJI9 974 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 SLFN11Q7Z7L1 901 aa14.36□□□□□ -0.11
RPP40-201ENST00000319533 PHLDB2Q86SQ0 1253 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms