RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 RAB3IPQ96QF0 476 aaPredicted RBP16.06■□□□□ 0.16
SHISA2-201ENST00000319420 ZBED2Q9BTP6 218 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 CINPQ9BW66 212 aaPredicted RBP16.06■□□□□ 0.16
SHISA2-201ENST00000319420 ACE2Q9BYF1 805 aaPredicted RBP16.06■□□□□ 0.16
SHISA2-201ENST00000319420 TM6SF2Q9BZW4 377 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 COL4A4P53420 1690 aaPredicted RBP16.06■□□□□ 0.16
SHISA2-201ENST00000319420 GREB1Q4ZG55 1949 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 PDHA1P08559 390 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 STMN1P16949 149 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 HOXD9P28356 352 aaPredicted RBP16.06■□□□□ 0.16
SHISA2-201ENST00000319420 MZF1P28698 734 aaPredicted RBP16.06■□□□□ 0.16
SHISA2-201ENST00000319420 RING1Q06587 406 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 IL10RBQ08334 325 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 NAB1Q13506 487 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 TMCO4Q5TGY1 634 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 ZNF781Q8N8C0 355 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 OR13J1Q8NGT2 312 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 BPIFA1Q9NP55 256 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 KCNK4Q9NYG8 393 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 XPR1Q9UBH6 696 aa16.06■□□□□ 0.16
SHISA2-201ENST00000319420 TSR3Q9UJK0 312 aaKnown RBP16.06■□□□□ 0.16
SHISA2-201ENST00000319420 HEATR9A2RTY3 570 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 TRAFD1O14545 582 aaPredicted RBP16.05■□□□□ 0.16
SHISA2-201ENST00000319420 PRAMEF11O60813 436 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 TBL1XO60907 577 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 ENTPD5O75356 428 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 HDCP19113 662 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 SLC8A1P32418 973 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 CDK18Q07002 472 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 SMARCB1Q12824 385 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 SLC39A11Q8N1S5 342 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 FSTL5Q8N475 847 aaPredicted RBP16.05■□□□□ 0.16
SHISA2-201ENST00000319420 POU5F2Q8N7G0 328 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 GPR22Q99680 433 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 LNPEPQ9UIQ6 1025 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 NRG2O14511 850 aaPredicted RBP16.05■□□□□ 0.16
SHISA2-201ENST00000319420 SERPINE1P05121 402 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 NCF2P19878 526 aaPredicted RBP16.05■□□□□ 0.16
SHISA2-201ENST00000319420 GABRR2P28476 465 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 CD151P48509 253 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 WDR5P61964 334 aaKnown RBP16.05■□□□□ 0.16
SHISA2-201ENST00000319420 PREPLQ4J6C6 727 aaPredicted RBP16.05■□□□□ 0.16
SHISA2-201ENST00000319420 RABGAP1LQ5R372 815 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 TSTD2Q5T7W7 516 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 WLSQ5T9L3 541 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 WDR75Q8IWA0 830 aaKnown RBP16.05■□□□□ 0.16
SHISA2-201ENST00000319420 HS6ST3Q8IZP7 471 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 PIWIL2Q8TC59 973 aaKnown RBP16.05■□□□□ 0.16
SHISA2-201ENST00000319420 TTLL2Q9BWV7 592 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 DENND2DQ9H6A0 471 aaPredicted RBP16.05■□□□□ 0.16
SHISA2-201ENST00000319420 MRPL17Q9NRX2 175 aaKnown RBP16.05■□□□□ 0.16
SHISA2-201ENST00000319420 TREX1Q9NSU2 369 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 TAS2R1Q9NYW7 299 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 SPG21Q9NZD8 308 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.05■□□□□ 0.16
SHISA2-201ENST00000319420 UBA2Q9UBT2 640 aaPredicted RBP16.05■□□□□ 0.16
SHISA2-201ENST00000319420 ACOT9Q9Y305 439 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 FNDC1Q4ZHG4 1894 aaPredicted RBP16.05■□□□□ 0.16
SHISA2-201ENST00000319420 A8MX80 341 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 GPR39O43194 453 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 ANP32DO95626 131 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 SERPINF2P08697 491 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 ESRRAP11474 423 aaPredicted RBP16.05■□□□□ 0.16
SHISA2-201ENST00000319420 DLG1Q12959 904 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 CFAP157Q5JU67 520 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 TMC7Q7Z402 723 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 MAVSQ7Z434 540 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 LRRC49Q8IUZ0 686 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 CENPLQ8N0S6 344 aaPredicted RBP16.05■□□□□ 0.16
SHISA2-201ENST00000319420 LPCAT1Q8NF37 534 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 C2orf15Q8WU43 125 aaKnown RBP16.05■□□□□ 0.16
SHISA2-201ENST00000319420 SORT1Q99523 831 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 OLFM1Q99784 485 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 VPS28Q9UK41 221 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 BACE2Q9Y5Z0 518 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 CPQQ9Y646 472 aa16.05■□□□□ 0.16
SHISA2-201ENST00000319420 PATJQ8NI35 1801 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 CHD9Q3L8U1 2897 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 DOCK4Q8N1I0 1966 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 UBA6A0AVT1 1052 aaPredicted RBP16.04■□□□□ 0.16
SHISA2-201ENST00000319420 G3V2L1 256 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 H0Y3Z8 333 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 K7ERQ8 282 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 TSPAN8P19075 237 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 CSE1LP55060 971 aaKnown RBP16.04■□□□□ 0.16
SHISA2-201ENST00000319420 SEMG2Q02383 582 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 DSG1Q02413 1049 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 PEX6Q13608 980 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 ST13P5Q8NFI4 369 aaPredicted RBP16.04■□□□□ 0.16
SHISA2-201ENST00000319420 WFDC5Q8TCV5 224 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 KCNV2Q8TDN2 545 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 SAGE1Q9NXZ1 904 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 FCF1Q9Y324 198 aaKnown RBP16.04■□□□□ 0.16
SHISA2-201ENST00000319420 INSL5Q9Y5Q6 135 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 MEI4A8MW99 385 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 E9PBE3 544 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 AP3B1O00203 1094 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 KLHL41O60662 606 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 ABLIM3O94929 683 aa16.04■□□□□ 0.16
SHISA2-201ENST00000319420 MT-CO1P00395 513 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms