RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 POU6F1Q14863 301 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 VPS26BQ4G0F5 336 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 PIWIL3Q7Z3Z3 882 aaKnown RBP9.73□□□□□ -0.85
PTPRA-202ENST00000318266 IGFN1Q86VF2 1251 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 CASP10Q92851 521 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 EXT2Q93063 718 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 VPS51Q9UID3 782 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 ZNF214Q9UL59 606 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-202ENST00000318266 CDH7Q9ULB5 785 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 KRBA1A5PL33 1030 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 ACKR2O00590 384 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 SLC22A2O15244 555 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 INHBBP09529 407 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 PROZP22891 400 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 CES1P23141 567 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 MYF6P23409 242 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 DCKP27707 260 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 ADSLP30566 484 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-202ENST00000318266 IREB2P48200 963 aaKnown RBP9.73□□□□□ -0.85
PTPRA-202ENST00000318266 SLC12A1Q13621 1099 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 TMEM132DQ14C87 1099 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 GEN1Q17RS7 908 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 ABRAXAS1Q6UWZ7 409 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 RETREG3Q86VR2 466 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 ANKFN1Q8N957 763 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 ANKRD52Q8NB46 1076 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 PDZD8Q8NEN9 1154 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 CHPT1Q8WUD6 406 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 HPS1Q92902 700 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 ISL2Q96A47 359 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 ELMO2Q96JJ3 720 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 SEPHS2Q99611 448 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 ADNPQ9H2P0 1102 aa9.73□□□□□ -0.85
PTPRA-202ENST00000318266 ZNF277Q9NRM2 450 aaPredicted RBP9.73□□□□□ -0.85
PTPRA-202ENST00000318266 UTP6Q9NYH9 597 aaKnown RBP9.73□□□□□ -0.85
PTPRA-202ENST00000318266 FAM155AB1AL88 458 aaPredicted RBP9.72□□□□□ -0.85
PTPRA-202ENST00000318266 NME4O00746 187 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 FARP2O94887 1054 aaPredicted RBP9.72□□□□□ -0.85
PTPRA-202ENST00000318266 APOA4P06727 396 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 BMP2P12643 396 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 IDO1P14902 403 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 NFKB1P19838 968 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 FASP25445 335 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 PTPN3P26045 913 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 CASP2P42575 452 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 RABGGTBP53611 331 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 PIGFQ07326 219 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 MOGQ16653 247 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 CYP51A1Q16850 503 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 SLC10A6Q3KNW5 377 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 FUT11Q495W5 492 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 IER5Q5VY09 327 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 NIPAL1Q6NVV3 410 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 PSTKQ8IV42 348 aaKnown RBP9.72□□□□□ -0.85
PTPRA-202ENST00000318266 MFSD6LQ8IWD5 586 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 DDIASQ8IXT1 998 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 DEFB106AQ8N104 65 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 PARP8Q8N3A8 854 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 DHRSXQ8N5I4 330 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 GABPB2Q8TAK5 448 aaPredicted RBP9.72□□□□□ -0.85
PTPRA-202ENST00000318266 SLC35F5Q8WV83 523 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 HDAC10Q969S8 669 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 HERC2P3Q9BVR0 1158 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 DGCR6LQ9BY27 220 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 MAF1Q9H063 256 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 PTPRHQ9HD43 1115 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 EIF2B3Q9NR50 452 aaKnown RBP9.72□□□□□ -0.85
PTPRA-202ENST00000318266 CD300AQ9UGN4 299 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 FAM32AQ9Y421 112 aaKnown RBP9.72□□□□□ -0.85
PTPRA-202ENST00000318266 NME7Q9Y5B8 376 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 FAM72CH0Y354 149 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 AURKAO14965 403 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 MAN1A2O60476 641 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 ALDH2P05091 517 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 IL10P22301 178 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 JAK1P23458 1154 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 PSMA4P25789 261 aaKnown RBP9.72□□□□□ -0.85
PTPRA-202ENST00000318266 EEF1DP29692 281 aaKnown RBP9.72□□□□□ -0.85
PTPRA-202ENST00000318266 RCVRNP35243 200 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 VEGFBP49765 207 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 DNASE1L3Q13609 305 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 FAM83EQ2M2I3 478 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 ZNF618Q5T7W0 954 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 FAM72AQ5TYM5 149 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 FAM72DQ6L9T8 149 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 USP50Q70EL3 339 aaPredicted RBP9.72□□□□□ -0.85
PTPRA-202ENST00000318266 FAM72BQ86X60 149 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 SULF1Q8IWU6 871 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 PELI3Q8N2H9 469 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 HEXDCQ8WVB3 486 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 KIF12Q96FN5 646 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 GPR22Q99680 433 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 SLX1AQ9BQ83 275 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 ACAD9Q9H845 621 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 CYP3A43Q9HB55 503 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 MRPL40Q9NQ50 206 aaKnown RBP9.72□□□□□ -0.85
PTPRA-202ENST00000318266 DPP3Q9NY33 737 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 GPRC5DQ9NZD1 345 aa9.72□□□□□ -0.85
PTPRA-202ENST00000318266 IFT80Q9P2H3 777 aaPredicted RBP9.72□□□□□ -0.85
PTPRA-202ENST00000318266 DSEQ9UL01 958 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms