RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 CDC73Q6P1J9 531 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 RRM2BQ7LG56 351 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 FAM160B2Q86V87 743 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 KLBQ86Z14 1044 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 C17orf53Q8N3J3 647 aaPredicted RBP4.26□□□□□ -1.73
SMCO3-201ENST00000316048 OR52N4Q8NGI2 321 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 RITA1Q96K30 269 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 NUF2Q9BZD4 464 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 IKZF4Q9H2S9 585 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 ZNF304Q9HCX3 659 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 ZNF70Q9UC06 446 aaPredicted RBP4.26□□□□□ -1.73
SMCO3-201ENST00000316048 RPS6KA6Q9UK32 745 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 TNS3Q68CZ2 1445 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 CEMIPQ8WUJ3 1361 aa4.26□□□□□ -1.73
SMCO3-201ENST00000316048 CYP2D7A0A087X1C5 515 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 OR6C68A6NDL8 312 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 NPIPB8E9PQR5 432 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 GCOM1H8Y6P7 765 aaPredicted RBP4.25□□□□□ -1.73
SMCO3-201ENST00000316048 PLOD3O60568 738 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 HMMRO75330 724 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 DDAH2O95865 285 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 CSH1P0DML2 217 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 CSH2P0DML3 217 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 AKR1A1P14550 325 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 PSMA4P25789 261 aaKnown RBP4.25□□□□□ -1.73
SMCO3-201ENST00000316048 FMO4P31512 558 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 OAZ1P54368 228 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 EIF3BP55884 814 aaKnown RBP4.25□□□□□ -1.73
SMCO3-201ENST00000316048 HOXA4Q00056 320 aaPredicted RBP4.25□□□□□ -1.73
SMCO3-201ENST00000316048 MTA1Q13330 715 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 IRF3Q14653 427 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 LCE3BQ5TA77 95 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 FAM171A1Q5VUB5 890 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 VSTM1Q6UX27 236 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 CLEC17AQ6ZS10 378 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 SLC46A3Q7Z3Q1 461 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 PAQR4Q8N4S7 273 aaPredicted RBP4.25□□□□□ -1.73
SMCO3-201ENST00000316048 LARP4BQ92615 738 aaKnown RBP4.25□□□□□ -1.73
SMCO3-201ENST00000316048 PABPC5Q96DU9 382 aaKnown RBP4.25□□□□□ -1.73
SMCO3-201ENST00000316048 SYNCQ9H7C4 482 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 CPNE5Q9HCH3 593 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 NKIRAS2Q9NYR9 191 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 STRCP1A6NGW2 1772 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 ALS2Q96Q42 1657 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 NCAPD2Q15021 1401 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 PLEKHG2Q9H7P9 1386 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 EMSYQ7Z589 1322 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 ZNF335Q9H4Z2 1342 aaPredicted RBP4.25□□□□□ -1.73
SMCO3-201ENST00000316048 SLC22A23A1A5C7 686 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 BTBD18B2RXH4 712 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 SEC14L2O76054 403 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 CCNDBP1O95273 360 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 ADRB2P07550 413 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 HSP90AB1P08238 724 aaKnown RBP4.25□□□□□ -1.73
SMCO3-201ENST00000316048 KRT4P19013 534 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 EIF2S2P20042 333 aaKnown RBP4.25□□□□□ -1.73
SMCO3-201ENST00000316048 DPP6P42658 865 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 AVPR1BP47901 424 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 OLR1P78380 273 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 IFI35P80217 286 aaPredicted RBP4.25□□□□□ -1.73
SMCO3-201ENST00000316048 FAM153CQ494X1 144 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 KIAA1755Q5JYT7 1200 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 HECTD2Q5U5R9 776 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 CEP85Q6P2H3 762 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 CHSY1Q86X52 802 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 GDPD5Q8WTR4 605 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 SCFD2Q8WU76 684 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 ZFPM2Q8WW38 1151 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 SLF1Q9BQI6 1058 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 ZNF341Q9BYN7 854 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 KIAA1456Q9P272 454 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 TTLL3Q9Y4R7 772 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 OVOS2A0A0G2JMS6 1433 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 CPDO75976 1380 aa4.25□□□□□ -1.73
SMCO3-201ENST00000316048 H7C1Q1 480 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 ERAL1O75616 437 aaKnown RBP4.24□□□□□ -1.73
SMCO3-201ENST00000316048 GCH1P30793 250 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 HOXA7P31268 230 aaPredicted RBP4.24□□□□□ -1.73
SMCO3-201ENST00000316048 CPOXP36551 454 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 FRG1Q14331 258 aaKnown RBP4.24□□□□□ -1.73
SMCO3-201ENST00000316048 PUM1Q14671 1186 aaKnown RBP eCLIP4.24□□□□□ -1.73
SMCO3-201ENST00000316048 PGM5Q15124 567 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 PFKFB3Q16875 520 aaPredicted RBP4.24□□□□□ -1.73
SMCO3-201ENST00000316048 NCEH1Q6PIU2 408 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 RBM44Q6ZP01 1051 aaKnown RBP4.24□□□□□ -1.73
SMCO3-201ENST00000316048 G2E3Q7L622 706 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 TADA2BQ86TJ2 420 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 GPAT4Q86UL3 456 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 TRIM74Q86UV6 250 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 TRIM73Q86UV7 250 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 ARL14EPQ8N8R7 260 aaPredicted RBP4.24□□□□□ -1.73
SMCO3-201ENST00000316048 PIGKQ92643 395 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 CALML4Q96GE6 196 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 ANP32EQ9BTT0 268 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 DCTPP1Q9H773 170 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 ATP8A2Q9NTI2 1148 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 DBF4Q9UBU7 674 aaPredicted RBP4.24□□□□□ -1.73
SMCO3-201ENST00000316048 DHDHQ9UQ10 334 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 LYVE1Q9Y5Y7 322 aa4.24□□□□□ -1.73
SMCO3-201ENST00000316048 STRCQ7RTU9 1775 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms