RNA–Protein interactions for RNA: ENST00000310189.3

CTDSPL-202, Transcript of CTD small phosphatase like, humanhuman

TSL 5

Gene CTDSPL, Length 1,482 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-202ENST00000310189 FCRL3Q96P31 734 aaPredicted RBP11.49□□□□□ -0.57
CTDSPL-202ENST00000310189 CDX2Q99626 313 aaPredicted RBP11.49□□□□□ -0.57
CTDSPL-202ENST00000310189 ATP13A3Q9H7F0 1226 aa11.49□□□□□ -0.57
CTDSPL-202ENST00000310189 ZFP14Q9HCL3 533 aa11.49□□□□□ -0.57
CTDSPL-202ENST00000310189 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.49□□□□□ -0.57
CTDSPL-202ENST00000310189 HACD3Q9P035 362 aa11.49□□□□□ -0.57
CTDSPL-202ENST00000310189 FCF1Q9Y324 198 aaKnown RBP11.49□□□□□ -0.57
CTDSPL-202ENST00000310189 RAI2Q9Y5P3 530 aa11.49□□□□□ -0.57
CTDSPL-202ENST00000310189 TRANK1O15050 2925 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 MYO7AQ13402 2215 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 CDH23Q9H251 3354 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 NUP210Q8TEM1 1887 aaPredicted RBP11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 ZCWPW2A0A1B0GU75 182 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 A0A1W2PQ67 120 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 TTC24A2A3L6 582 aaPredicted RBP11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 CXorf49A8MYA2 514 aaPredicted RBP11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 COPEO14579 308 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 MUSKO15146 869 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 TM9SF1O15321 606 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 SHOX2O60902 331 aaPredicted RBP11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 TBX10O75333 385 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 VAPBO95292 243 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 ASLP04424 464 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 CR2P20023 1033 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 NFKBIAP25963 317 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 NMBRP28336 390 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 SERPINA4P29622 427 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 CHRNA4P43681 627 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 RPL26P61254 145 aaKnown RBP11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 ECT2LQ008S8 904 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 DHCR24Q15392 516 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 FAM78AQ5JUQ0 283 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 TSTD2Q5T7W7 516 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 ARMC12Q5T9G4 340 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 NCEH1Q6PIU2 408 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 PACS1Q6VY07 963 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 C4orf33Q8N1A6 199 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 PCDH20Q8N6Y1 951 aaKnown RBP11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 WFDC5Q8TCV5 224 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 MGARPQ8TDB4 240 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 ACMSDQ8TDX5 336 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 STYXQ8WUJ0 223 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 CABS1Q96KC9 395 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 ASB16Q96NS5 453 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 PAIP2Q9BPZ3 127 aaKnown RBP11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 TDRD1Q9BXT4 1180 aaKnown RBP11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 CEP44Q9C0F1 390 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 NSRP1Q9H0G5 558 aaKnown RBP11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 LINC00597Q9H2U6 94 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 IARS2Q9NSE4 1012 aaKnown RBP11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 CDH7Q9ULB5 785 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 RIMKLBQ9ULI2 386 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 RPL26L1Q9UNX3 145 aaKnown RBP11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 CHKBQ9Y259 395 aa11.48□□□□□ -0.57
CTDSPL-202ENST00000310189 NRG2O14511 850 aaPredicted RBP11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 SOCS5O75159 536 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 SPAG7O75391 227 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 PIAS1O75925 651 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 GSRP00390 522 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 NEFHP12036 1026 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 LSP1P33241 339 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 MTHFRP42898 656 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 DGKGP49619 791 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 SLC12A2P55011 1212 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 GALNT3Q14435 633 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 E2F5Q15329 346 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 SKIV2LQ15477 1246 aaKnown RBP11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 TAF1AQ15573 450 aaPredicted RBP11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 CCDC85BQ15834 202 aaPredicted RBP11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 CNGA3Q16281 694 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 CTC1Q2NKJ3 1217 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 TEDDM1Q5T9Z0 273 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 MROH9Q5TGP6 573 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 TTC19Q6DKK2 380 aaPredicted RBP11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 SYCE2Q6PIF2 218 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 KIAA0408Q6ZU52 694 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 NUDT18Q6ZVK8 323 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 SDCCAG8Q86SQ7 713 aaPredicted RBP11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 RNF135Q8IUD6 432 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 CPA6Q8N4T0 437 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 LPCAT1Q8NF37 534 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 OR2AP1Q8NGE2 309 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 OR6P1Q8NGX9 317 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 TUBGCP5Q96RT8 1024 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 TRIM56Q9BRZ2 755 aaKnown RBP11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 TM6SF2Q9BZW4 377 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 TRPV4Q9HBA0 871 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 CLEC1BQ9P126 229 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 LHX3Q9UBR4 397 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 HS3ST2Q9Y278 367 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 PCDHGC4Q9Y5F7 938 aa11.47□□□□□ -0.57
CTDSPL-202ENST00000310189 A0A1W2PPM1 405 aa11.46□□□□□ -0.57
CTDSPL-202ENST00000310189 CCDC78A2IDD5 438 aa11.46□□□□□ -0.57
CTDSPL-202ENST00000310189 HEPACAM2A8MVW5 462 aa11.46□□□□□ -0.57
CTDSPL-202ENST00000310189 ANKRD66B4E2M5 251 aa11.46□□□□□ -0.57
CTDSPL-202ENST00000310189 SLC7A4O43246 635 aa11.46□□□□□ -0.57
CTDSPL-202ENST00000310189 HOXC11O43248 304 aaPredicted RBP11.46□□□□□ -0.57
CTDSPL-202ENST00000310189 POP4O95707 220 aaKnown RBP11.46□□□□□ -0.57
CTDSPL-202ENST00000310189 ATXN1LP0C7T5 689 aaKnown RBP11.46□□□□□ -0.57
CTDSPL-202ENST00000310189 PYGBP11216 843 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms