RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 MARCH4Q9P2E8 410 aaPredicted RBP11.63□□□□□ -0.55
PTPN2-201ENST00000309660 SUFUQ9UMX1 484 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 SCML2Q9UQR0 700 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 H2AFYO75367 372 aaKnown RBP11.63□□□□□ -0.55
PTPN2-201ENST00000309660 SUPT7LO94864 414 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 RAG1P15918 1043 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 ALOX15P16050 662 aaPredicted RBP11.63□□□□□ -0.55
PTPN2-201ENST00000309660 CDH13P55290 713 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 ZNF33AQ06730 810 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 EIF4EBP2Q13542 120 aaPredicted RBP11.63□□□□□ -0.55
PTPN2-201ENST00000309660 TSTD2Q5T7W7 516 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 RASIP1Q5U651 963 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 KIAA0930Q6ICG6 404 aaPredicted RBP11.63□□□□□ -0.55
PTPN2-201ENST00000309660 KLC3Q6P597 504 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 COLGALT2Q8IYK4 626 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 LSMEM2Q8N112 164 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 C2CD4AQ8NCU7 369 aaPredicted RBP11.63□□□□□ -0.55
PTPN2-201ENST00000309660 FAM156AQ8NDB6 213 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 PDCD6IPQ8WUM4 868 aaKnown RBP11.63□□□□□ -0.55
PTPN2-201ENST00000309660 NPAS2Q99743 824 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 CRISPLD1Q9H336 500 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 S100A14Q9HCY8 104 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 TREX1Q9NSU2 369 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 ARL5AQ9Y689 179 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 TDRD15B5MCY1 1934 aaKnown RBP11.63□□□□□ -0.55
PTPN2-201ENST00000309660 MKI67P46013 3256 aaKnown RBP11.63□□□□□ -0.55
PTPN2-201ENST00000309660 CACNG3O60359 315 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 TLR5O60602 858 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 SMNDC1O75940 238 aaKnown RBP eCLIP11.63□□□□□ -0.55
PTPN2-201ENST00000309660 THRAP10827 490 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 RHOQP17081 205 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 GCKP35557 465 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 DSG1Q02413 1049 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 IHHQ14623 411 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 SIRPB2Q5JXA9 342 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 LAYNQ6UX15 382 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 LGI2Q8N0V4 545 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 ANKRD49Q8WVL7 239 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 ANKRD27Q96NW4 1050 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 PRKD2Q9BZL6 878 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 STARD7Q9NQZ5 370 aa11.63□□□□□ -0.55
PTPN2-201ENST00000309660 A0A0D9SEW6 157 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 IGHA2P01877 340 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 RPL17P18621 184 aaKnown RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 HOXC13P31276 330 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 CCNIQ14094 377 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 HECTD2Q5U5R9 776 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 AGAP9Q5VTM2 703 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 CLEC6AQ6EIG7 209 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 KDELC1Q6UW63 502 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 PRSS55Q6UWB4 352 aaPredicted RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 FBXW8Q8N3Y1 598 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 KYQ8NBH2 561 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 OR13C4Q8NGS5 318 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 RDH11Q8TC12 318 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 ACTRT2Q8TDY3 377 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 SH3RF2Q8TEC5 729 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 BHMTQ93088 406 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 IMP4Q96G21 291 aaKnown RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 MRPL57Q9BQC6 102 aaKnown RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 MCMBPQ9BTE3 642 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 RGS18Q9NS28 235 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 TSR3Q9UJK0 312 aaKnown RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 GPC4O75487 556 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 OAZ2O95190 189 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 PRSS56P0CW18 603 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 PMLP29590 882 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 PPARGP37231 505 aaPredicted RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 NME5P56597 212 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 FRG1Q14331 258 aaKnown RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 MMEL1Q495T6 779 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 RNF19BQ6ZMZ0 732 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 DSELQ8IZU8 1212 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 PAF1Q8N7H5 531 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 DBF4BQ8NFT6 615 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 RMDN1Q96DB5 314 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 DNAJC1Q96KC8 554 aaKnown RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 BTN2A3PQ96KV6 586 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 ZNF512Q96ME7 567 aaPredicted RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 GPR78Q96P69 363 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 CYP2S1Q96SQ9 504 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 TLR8Q9NR97 1041 aaKnown RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 ADA2Q9NZK5 511 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 SCOCQ9UIL1 159 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 LRFN2Q9ULH4 789 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 ZNF236Q9UL36 1845 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 RGSL1A5PLK6 1076 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 FKBP6O75344 327 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 RPLP2P05387 115 aaKnown RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 IRF1P10914 325 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 HDCP19113 662 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 GLDCP23378 1020 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 ATP5F1P24539 256 aaPredicted RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 PEX2P28328 305 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 KPNA2P52292 529 aaKnown RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 MRPS22P82650 360 aaKnown RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 MRPS35P82673 323 aaKnown RBP11.62□□□□□ -0.55
PTPN2-201ENST00000309660 POU4F1Q01851 419 aa11.62□□□□□ -0.55
PTPN2-201ENST00000309660 CDC16Q13042 620 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms