RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 PRKAR2AP13861 404 aaKnown RBP18.7■□□□□ 0.58
UBXN2A-201ENST00000309033 ZNF37AP17032 561 aaPredicted RBP18.7■□□□□ 0.58
UBXN2A-201ENST00000309033 MC4RP32245 332 aa18.7■□□□□ 0.58
UBXN2A-201ENST00000309033 SEMA5AQ13591 1074 aa18.7■□□□□ 0.58
UBXN2A-201ENST00000309033 MAPKAPK3Q16644 382 aa18.7■□□□□ 0.58
UBXN2A-201ENST00000309033 USP41Q3LFD5 358 aa18.7■□□□□ 0.58
UBXN2A-201ENST00000309033 TOP6BLQ8N6T0 577 aa18.7■□□□□ 0.58
UBXN2A-201ENST00000309033 OR4L1Q8NH43 312 aa18.7■□□□□ 0.58
UBXN2A-201ENST00000309033 LINGO1Q96FE5 620 aa18.7■□□□□ 0.58
UBXN2A-201ENST00000309033 TLR5O60602 858 aa18.7■□□□□ 0.58
UBXN2A-201ENST00000309033 CST3P01034 146 aaPredicted RBP18.7■□□□□ 0.58
UBXN2A-201ENST00000309033 PSEN1P49768 467 aa18.7■□□□□ 0.58
UBXN2A-201ENST00000309033 QPCTQ16769 361 aa18.7■□□□□ 0.58
UBXN2A-201ENST00000309033 CAMKK1Q8N5S9 505 aa18.7■□□□□ 0.58
UBXN2A-201ENST00000309033 ATP12AP54707 1039 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 SMAD3P84022 425 aaKnown RBP18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 PSMD5Q16401 504 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 FBXW8Q8N3Y1 598 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 RAD21L1Q9H4I0 556 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 LRRC4CQ9HCJ2 640 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 CSH1P0DML2 217 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 CSH2P0DML3 217 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 SLC25A52Q3SY17 297 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 OTOP3Q7RTS5 596 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 PPTC7Q8NI37 304 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 TMEM216Q9P0N5 145 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 LEF1Q9UJU2 399 aaPredicted RBP18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 GIT1Q9Y2X7 761 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 PTCH2Q9Y6C5 1203 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 FOXO6A8MYZ6 492 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 ANPEPP15144 967 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 APTXQ7Z2E3 356 aaKnown RBP18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 HDDC2Q7Z4H3 204 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 CACTIN-AS1Q8N1I8 211 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 PPP1R14AQ96A00 147 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 LOC100506127A0A0U1RQW1 187 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 CTNNB1P35222 781 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 THOP1P52888 689 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 CDK18Q07002 472 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 H0YC42 278 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 CHN2P52757 468 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 CDH13P55290 713 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 KCTD21Q4G0X4 260 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 FNBP1LQ5T0N5 605 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 KCTD15Q96SI1 283 aaPredicted RBP18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 OSBPL6Q9BZF3 934 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 FBXO5Q9UKT4 447 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 SORCS3Q9UPU3 1222 aa18.69■□□□□ 0.58
UBXN2A-201ENST00000309033 A0A087WXM4 84 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 IL1BP01584 269 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 SERPINA6P08185 405 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 MMP3P08254 477 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 WNT3AP56704 352 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 PCBP1Q15365 356 aaKnown RBP eCLIP18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 DGUOKQ16854 277 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 ZNF549Q6P9A3 640 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 C11orf88Q6PI97 169 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 TSHZ1Q6ZSZ6 1077 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 CAMK1DQ8IU85 385 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 LRRC52Q8N7C0 313 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 KLRG1Q96E93 195 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 MDM4O15151 490 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 NOL4O94818 638 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 CTSEP14091 401 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 CPSF6Q16630 551 aaKnown RBP eCLIP18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 PREPLQ4J6C6 727 aaPredicted RBP18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 TRABD2AQ86V40 505 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 POMGNT2Q8NAT1 580 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 ACMSDQ8TDX5 336 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 CLIP3Q96DZ5 547 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 REXO5Q96IC2 774 aaKnown RBP18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 CDH19Q9H159 772 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 LRMDAQ9H2I8 198 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 LPOP22079 712 aaPredicted RBP18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 STX4Q12846 297 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 ZNF544Q6NX49 715 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 SERPINA13PQ6UXR4 307 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 AMIGO2Q86SJ2 522 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 NAT16Q8N8M0 369 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 HJURPQ8NCD3 748 aaPredicted RBP18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 HDAC3O15379 428 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 BIRC5O15392 142 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 MED26O95402 600 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 SPESP1Q6UW49 350 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 C1QTNF7Q9BXJ2 289 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 CNGB3Q9NQW8 809 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 ENOPH1Q9UHY7 261 aa18.68■□□□□ 0.58
UBXN2A-201ENST00000309033 TRIM38O00635 465 aa18.67■□□□□ 0.58
UBXN2A-201ENST00000309033 RNF44Q7L0R7 432 aa18.67■□□□□ 0.58
UBXN2A-201ENST00000309033 POLR1DQ9Y2S0 133 aa18.67■□□□□ 0.58
UBXN2A-201ENST00000309033 MRPS23Q9Y3D9 190 aaKnown RBP18.67■□□□□ 0.58
UBXN2A-201ENST00000309033 PCDHB9Q9Y5E1 797 aa18.67■□□□□ 0.58
UBXN2A-201ENST00000309033 INO80DQ53TQ3 878 aaPredicted RBP18.67■□□□□ 0.58
UBXN2A-201ENST00000309033 NPAS2Q99743 824 aa18.67■□□□□ 0.58
UBXN2A-201ENST00000309033 BRD9Q9H8M2 597 aa18.67■□□□□ 0.58
UBXN2A-201ENST00000309033 ATAD3AQ9NVI7 634 aa18.67■□□□□ 0.58
UBXN2A-201ENST00000309033 SMIM31A0A1B0GVY4 71 aa18.67■□□□□ 0.58
UBXN2A-201ENST00000309033 NPEPPSL1A6NEC2 478 aa18.67■□□□□ 0.58
UBXN2A-201ENST00000309033 SGTAO43765 313 aa18.67■□□□□ 0.58
UBXN2A-201ENST00000309033 RECQL5O94762 991 aaPredicted RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms