RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 ELP6Q0PNE2 266 aa21■□□□□ 0.95
MRPL39-201ENST00000307301 MARC1Q5VT66 337 aa21■□□□□ 0.95
MRPL39-201ENST00000307301 LRRC38Q5VT99 294 aa21■□□□□ 0.95
MRPL39-201ENST00000307301 BRAT1Q6PJG6 821 aa21■□□□□ 0.95
MRPL39-201ENST00000307301 ABI3BPQ7Z7G0 1075 aa21■□□□□ 0.95
MRPL39-201ENST00000307301 GATAD2AQ86YP4 633 aa21■□□□□ 0.95
MRPL39-201ENST00000307301 TMTC1Q8IUR5 882 aa21■□□□□ 0.95
MRPL39-201ENST00000307301 LRRC49Q8IUZ0 686 aa21■□□□□ 0.95
MRPL39-201ENST00000307301 BBS5Q8N3I7 341 aa21■□□□□ 0.95
MRPL39-201ENST00000307301 CXorf40AQ8TE69 158 aa21■□□□□ 0.95
MRPL39-201ENST00000307301 RHBDD1Q8TEB9 315 aa21■□□□□ 0.95
MRPL39-201ENST00000307301 BMFQ96LC9 184 aa21■□□□□ 0.95
MRPL39-201ENST00000307301 RNF157Q96PX1 679 aa21■□□□□ 0.95
MRPL39-201ENST00000307301 KLF6Q99612 283 aaPredicted RBP21■□□□□ 0.95
MRPL39-201ENST00000307301 MGME1Q9BQP7 344 aa21■□□□□ 0.95
MRPL39-201ENST00000307301 PCDH12Q9NPG4 1184 aa21■□□□□ 0.95
MRPL39-201ENST00000307301 HS3ST3A1Q9Y663 406 aa21■□□□□ 0.95
MRPL39-201ENST00000307301 EPN1Q9Y6I3 576 aaPredicted RBP21■□□□□ 0.95
MRPL39-201ENST00000307301 POM121BA6NF01 834 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 A6NNZ2 444 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 SPOPO43791 374 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 NDUFA10O95299 355 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 KRT1P04264 644 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 CR2P20023 1033 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 HSPA9P38646 679 aaKnown RBP20.99■□□□□ 0.95
MRPL39-201ENST00000307301 ARRB1P49407 418 aaPredicted RBP20.99■□□□□ 0.95
MRPL39-201ENST00000307301 MAXP61244 160 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 SLC10A2Q12908 348 aaPredicted RBP20.99■□□□□ 0.95
MRPL39-201ENST00000307301 TMEM52BQ4KMG9 183 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 PTAR1Q7Z6K3 402 aaPredicted RBP20.99■□□□□ 0.95
MRPL39-201ENST00000307301 RHOT1Q8IXI2 618 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 OXR1Q8N573 874 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 BAHD1Q8TBE0 780 aaPredicted RBP20.99■□□□□ 0.95
MRPL39-201ENST00000307301 LRRN4Q8WUT4 740 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 ASB12Q8WXK4 309 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 ECHDC3Q96DC8 303 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 LENG8Q96PV6 779 aaPredicted RBP20.99■□□□□ 0.95
MRPL39-201ENST00000307301 NUDCD1Q96RS6 583 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 ANP32EQ9BTT0 268 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 GOLPH3Q9H4A6 298 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 SCUBE2Q9NQ36 999 aa20.99■□□□□ 0.95
MRPL39-201ENST00000307301 TDRD6O60522 2096 aaKnown RBP20.98■□□□□ 0.95
MRPL39-201ENST00000307301 TRAFD1O14545 582 aaPredicted RBP20.98■□□□□ 0.95
MRPL39-201ENST00000307301 RIOK3O14730 519 aaKnown RBP20.98■□□□□ 0.95
MRPL39-201ENST00000307301 YKT6O15498 198 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 TM7SF2O76062 418 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 EPHA8P29322 1005 aaPredicted RBP20.98■□□□□ 0.95
MRPL39-201ENST00000307301 GRK6P43250 576 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 RXRGP48443 463 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 SEMG2Q02383 582 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 FOXC1Q12948 553 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 BNIP3Q12983 259 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 IFI16Q16666 785 aaKnown RBP20.98■□□□□ 0.95
MRPL39-201ENST00000307301 ERAP2Q6P179 960 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 RAD9BQ6WBX8 426 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 KYAT3Q6YP21 454 aaKnown RBP20.98■□□□□ 0.95
MRPL39-201ENST00000307301 KDM7AQ6ZMT4 941 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 Q6ZSR6 202 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 SLC22A18ASQ8N1D0 253 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 TEX26Q8N6G2 289 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 PAF1Q8N7H5 531 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 SAP25Q8TEE9 199 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 RNF25Q96BH1 459 aaPredicted RBP20.98■□□□□ 0.95
MRPL39-201ENST00000307301 NOD2Q9HC29 1040 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 NT5MQ9NPB1 228 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 LUC7LQ9NQ29 371 aaKnown RBP20.98■□□□□ 0.95
MRPL39-201ENST00000307301 ATP8A1Q9Y2Q0 1164 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 COQ6Q9Y2Z9 468 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 ALG6Q9Y672 507 aa20.98■□□□□ 0.95
MRPL39-201ENST00000307301 COL5A1P20908 1838 aaPredicted RBP20.97■□□□□ 0.95
MRPL39-201ENST00000307301 A0A0A6YYK5 440 aaPredicted RBP20.97■□□□□ 0.95
MRPL39-201ENST00000307301 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.97■□□□□ 0.95
MRPL39-201ENST00000307301 ZNF487B1APH4 448 aa20.97■□□□□ 0.95
MRPL39-201ENST00000307301 FPGTO14772 594 aa20.97■□□□□ 0.95
MRPL39-201ENST00000307301 ITGAVP06756 1048 aa20.97■□□□□ 0.95
MRPL39-201ENST00000307301 MMP12P39900 470 aa20.97■□□□□ 0.95
MRPL39-201ENST00000307301 TIGD7Q6NT04 549 aaPredicted RBP20.97■□□□□ 0.95
MRPL39-201ENST00000307301 VSIG1Q86XK7 387 aa20.97■□□□□ 0.95
MRPL39-201ENST00000307301 PLD5Q8N7P1 536 aa20.97■□□□□ 0.95
MRPL39-201ENST00000307301 DENND6BQ8NEG7 585 aa20.97■□□□□ 0.95
MRPL39-201ENST00000307301 FAM174AQ8TBP5 190 aa20.97■□□□□ 0.95
MRPL39-201ENST00000307301 CENPTQ96BT3 561 aa20.97■□□□□ 0.95
MRPL39-201ENST00000307301 TSGA13Q96PP4 275 aa20.97■□□□□ 0.95
MRPL39-201ENST00000307301 DDX56Q9NY93 547 aaKnown RBP20.97■□□□□ 0.95
MRPL39-201ENST00000307301 DTLQ9NZJ0 730 aa20.97■□□□□ 0.95
MRPL39-201ENST00000307301 PCDHGC4Q9Y5F7 938 aa20.97■□□□□ 0.95
MRPL39-201ENST00000307301 RCCD1A6NED2 376 aa20.96■□□□□ 0.95
MRPL39-201ENST00000307301 MATN3O15232 486 aa20.96■□□□□ 0.95
MRPL39-201ENST00000307301 TOP3BO95985 862 aaKnown RBP20.96■□□□□ 0.95
MRPL39-201ENST00000307301 CCNCP24863 283 aa20.96■□□□□ 0.95
MRPL39-201ENST00000307301 CDC25BP30305 580 aa20.96■□□□□ 0.95
MRPL39-201ENST00000307301 INAVAQ3KP66 663 aa20.96■□□□□ 0.95
MRPL39-201ENST00000307301 ODF2Q5BJF6 829 aa20.96■□□□□ 0.95
MRPL39-201ENST00000307301 SLC9A4Q6AI14 798 aa20.96■□□□□ 0.95
MRPL39-201ENST00000307301 GLRX5Q86SX6 157 aa20.96■□□□□ 0.95
MRPL39-201ENST00000307301 SPC24Q8NBT2 197 aa20.96■□□□□ 0.95
MRPL39-201ENST00000307301 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.96■□□□□ 0.95
MRPL39-201ENST00000307301 MAML1Q92585 1016 aa20.96■□□□□ 0.95
MRPL39-201ENST00000307301 CAAP1Q9H8G2 361 aa20.96■□□□□ 0.95
MRPL39-201ENST00000307301 GPR27Q9NS67 375 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms