RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 HOMEZQ8IX15 550 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 POMGNT2Q8NAT1 580 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 LMLNQ96KR4 655 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 KCTD15Q96SI1 283 aaPredicted RBP10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 SPATA6Q9NWH7 488 aaPredicted RBP10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 SOX13Q9UN79 622 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 YIPF1Q9Y548 306 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 ZNF780BQ9Y6R6 833 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 ANKRD65E5RJM6 399 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 CYTH1Q15438 398 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 XKR4Q5GH76 650 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 LRRC73Q5JTD7 316 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 C12orf56Q8IXR9 622 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 GPR156Q8NFN8 814 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 RIN3Q8TB24 985 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 ZNF384Q8TF68 577 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 ZNF473Q8WTR7 871 aaKnown RBP10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 NSL1Q96IY1 281 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 KCTD14Q9BQ13 255 aaPredicted RBP10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 USE1Q9NZ43 259 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 TMCO1Q9UM00 188 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 PDHA1P08559 390 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 MYBL2P10244 700 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 PTPN9P43378 593 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 ACSM2AQ08AH3 577 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 ACSM2BQ68CK6 577 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 LRRC55Q6ZSA7 311 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 OR7D4Q8NG98 312 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 JOSD2Q8TAC2 188 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 DQX1Q8TE96 717 aaKnown RBP10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 AP2M1Q96CW1 435 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 FGFBP2Q9BYJ0 223 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 BCO2Q9BYV7 579 aa10.77□□□□□ -0.69
SYNPO2-201ENST00000307142 ANXA6P08133 673 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 PDGFRLQ15198 375 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 FAM129CQ86XR2 697 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 HNRNPABQ99729 332 aaKnown RBP10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 UBDO15205 165 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 PAPSS1O43252 624 aaPredicted RBP10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 RHOQP17081 205 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 GNPDA1P46926 289 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 SLC11A1P49279 550 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 OCA2Q04671 838 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 ILF3Q12906 894 aaKnown RBP eCLIP10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 NAB1Q13506 487 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 ESRP1Q6NXG1 681 aaKnown RBP10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 TMEM132CQ8N3T6 1108 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 METTL21AQ8WXB1 218 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 PPP1R14AQ96A00 147 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 SUSD3Q96L08 255 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 VIPAS39Q9H9C1 493 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 DNAJC28Q9NX36 388 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 NOP53Q9NZM5 478 aaKnown RBP10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 CA14Q9ULX7 337 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 ZNF232Q9UNY5 417 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 SLC12A4Q9UP95 1085 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 FFAR2O15552 330 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 PPP1R37O75864 691 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 THRAP10827 490 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 PSMA3P25788 255 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 BLKP51451 505 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 AQP5P55064 265 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 LPIN1Q14693 890 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 AP5B1Q2VPB7 878 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 GFM2Q969S9 779 aaKnown RBP10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 LINGO1Q96FE5 620 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 EFCAB1Q9HAE3 211 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 FFAR3O14843 346 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 GPR42O15529 346 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 LTA4HP09960 611 aaKnown RBP10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 IQCF3P0C7M6 154 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 CDH3P22223 829 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 CDK16Q00536 496 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 LRRC23Q53EV4 343 aaPredicted RBP10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 UNC5AQ6ZN44 842 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 TMEM192Q8IY95 271 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 ANKRD49Q8WVL7 239 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 REXO5Q96IC2 774 aaKnown RBP10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 PDLIM2Q96JY6 352 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 MAGEB18Q96M61 343 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 TRIT1Q9H3H1 467 aaKnown RBP10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 N6AMT1Q9Y5N5 214 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 CPED1A4D0V7 1026 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 GTPBP1O00178 669 aaKnown RBP10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 GRK2P25098 689 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 PTPN20Q4JDL3 420 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 PAPD7Q5XG87 772 aaKnown RBP10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 STARD8Q92502 1023 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 NCDNQ9UBB6 729 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 HEY2Q9UBP5 337 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 MYH4Q9Y623 1939 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 HIST1H2ABP04908 130 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 ADRA1BP35368 520 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 CSKP41240 450 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 JAG1P78504 1218 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 ARSIQ5FYB1 569 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 HIST3H2AQ7L7L0 130 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 SLC4A11Q8NBS3 891 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 TRPC4APQ8TEL6 797 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 HIST1H2ACQ93077 130 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms